Vigna umbellata (ricebean): 124827123
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Entry
124827123 CDS
T09662
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124827123
03041 Spliceosome [BR:
vum03041
]
124827123
03036 Chromosome and associated proteins [BR:
vum03036
]
124827123
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124827123
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124827123
mRNA cycle factors
Common to processing body (P body) and stress granule
124827123
Spliceosome [BR:
vum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124827123
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124827123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
124827123
NCBI-ProteinID:
XP_047156073
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MRTSWADLAANSAAENSGPAFSANNVGTGSTVAPSRPVYVPPHLRNRQPSAEAPVPAPAP
AYSGPSSGSVGSSAAGNSGSRWPAPRNDHRSGYGGGGGRPGGWGNRSGGWDRGREVNPFE
EEDNAEDAFDEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIRRCKYV
KPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTVYPL
ALVLSPTRELSMQIHEEARKFSFQTGVKVVVAYGGAPINQQLRDLERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKE
IQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQA
LTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALADLMQE
ANQEVPAWLSRYAARSYSGGRNRRSGGRFGSRDFRREGSFTRGSSDYYSAGNSSGGYGGS
GGYAGGYGPGVTSAWD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgatttggctgcaaattctgcagctgaaaattcgggtcccgct
ttttctgctaacaatgtgggaactggtagcactgtagctccttcacgaccagtttatgtt
cctcctcatcttaggaaccgccagccatcagcggaagccccagtcccagccccagcccca
gcatacagtggtccttcttctggttctgttggctctagtgctgctggtaattctggatcc
cgttggcctgcacccagaaacgatcatcgttctgggtatggtggtggtggtggacgccca
ggtggatggggaaatagaagtggtgggtgggatcgtggcagggaggtcaacccctttgaa
gaagaggataatgctgaagacgcatttgatgagcaggagaatacaggaataaattttgat
gcatatgaggacattccggtggagaccagtggtgaaaatgtgcccccacctgtgaataca
tttgcagagattgacttgggtgatgcacttaatcagaatataagaaggtgcaaatatgtg
aagccaacacctgttcagcggcatgccataccaatatccctaggtggacgggatttgatg
gcttgtgcacagactggttctggaaagacagctgcattctgtttcccgatcatcagtgga
attatgaggggccaacctgtccagaggccacctcgtggggtgcgtactgtgtatccactt
gcgcttgttctctctccaacgagggagctatcaatgcaaatacatgaagaggctaggaag
ttttcattccaaactggtgttaaggtggttgttgcttatggtggagcaccaataaatcag
cagctgcgggatcttgagagaggggtggacattcttgttgcaactcctggaagactggta
gatttgctggagagagctagagtttcactgcagatgattcgatatctggccttagatgag
gcagatcggatgctagatatgggttttgagccacaaataaggaagattgtagaacaaatg
gacatgcctccaccaggtgctagacagactatgttgtttagtgcaacatttccgaaagag
atacagagactggcttctgattttctttcaaattatattttcctggctgttggaagagtg
ggttcaagtactgatttaattgtccaaagagttgagtacgttcaagagtctgacaagaga
agtcacctaatggaccttcttcatgcacagagggcaaatggtgtacagggaaagcaagct
ttgactttagtttttgtggagacaaagaagggagctgattcactggaacactggttgtgt
cttaatggttttcctgcaactactattcatggtgacagatcgcagcaggaaagagaatta
gcattgaggtcttttaaaagtggcaacacccccatattggttgctaccgatgttgctgca
cgtggtcttgatatcccccatgttgctcatgtagtcaactttgacctgccaaatgatatt
gatgattatgtacaccggattggaagaacagggcgagctggaaagaaaggccttgcaact
gcattctttaatgataacaattcatcactagctagagctttagccgatctgatgcaagaa
gcaaatcaagaagtacctgcttggctctctcggtatgctgctcggtcttatagtggaggc
agaaaccgccgatcaggtggtcggtttggtagtcgagactttcggagagagggctcgttt
acaaggggttcttcagattactacagtgctggaaacagcagtggtggatatggaggttct
gggggatatgctggagggtatggtcccggcgtcactagtgcctgggactga
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