Vigna umbellata (ricebean): 124827320
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Entry
124827320 CDS
T09662
Symbol
LOC124827320
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124827320 (LOC124827320)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124827320 (LOC124827320)
03009 Ribosome biogenesis [BR:
vum03009
]
124827320 (LOC124827320)
04131 Membrane trafficking [BR:
vum04131
]
124827320 (LOC124827320)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vum04147
]
124827320 (LOC124827320)
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124827320 (LOC124827320)
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124827320 (LOC124827320)
Membrane trafficking [BR:
vum04131
]
SNARE
SNARE associated proteins
Others
124827320 (LOC124827320)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124827320 (LOC124827320)
Exosome [BR:
vum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124827320 (LOC124827320)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_2
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
nSTAND3
AAA_28
ATPase_2
Parvo_NS1
AAA_18
nSTAND_NTPase5
ABC_tran
NB-ARC
AAA_7
Viral_helicase1
TsaE
IstB_IS21
NACHT
DUF815
Zeta_toxin
AAA_lid_PRS2_C
AAA_24
Zot
ARC_lid
Motif
Other DBs
NCBI-GeneID:
124827320
NCBI-ProteinID:
XP_047156303
LinkDB
All DBs
Position
8:30790833..30794979
Genome browser
AA seq
809 aa
AA seq
DB search
MANQPESSDAKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPDTMDKLQLFRGD
TILLKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHACPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRKRDN
PEAMEEDIEEEEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFS
DTSAGGAGAGAASDPFASAGGADEDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccaacccgagtcctccgatgctaagggaacaaagagagatttcagtaccgcg
atcttggagcgcaagaaggcgcccaaccgactcgtcgttgacgaagccgtaaacgatgac
aactccgtcgtcgcgctccaccctgataccatggataagctccagcttttccgcggagac
acaattcttctcaagggcaagaagaggaaggatactgtctgtattgcccttgccgatgat
acctgtgaggagcccaagatacggatgaacaaggtcgtcaggagcaaccttagggttaga
ctcggtgacgttgtctccgttcacgcatgccctgatgttaagtacggaaagagagtgcac
attcttcccgtcgatgacaccattgagggcgttactgggaatctcttcgatgcttacttg
aagccttatttccttgaggcatatagaccagtgaggaaaggtgacttgtttcttgtgaga
ggtgggatgagaagtgtagagttcaaggttattgaaaccgatcctgcagagtattgtgtt
gttgctcctgacactgagatcttctgtgagggtgagcctgttaaaagggaagatgagaat
cggttggacgaggttggttatgacgatgttggtggtgttagaaagcagatggcacagatt
agggaactggtggaactgccattgaggcatccacagttgttcaaatctattggtgttaag
ccacctaagggaattctgctatatggaccccccgggtctggtaagactttgattgctcga
gctgttgcaaatgaaactggagccttctttttctgcattaatggtcctgagatcatgtca
aaattggctggtgagagtgaaagcaatctgaggaaggcatttgaagaagctgagaagaat
gcaccctctattatcttcattgatgagatagattcgatagctccaaagagggagaagact
cacggggaagttgagaggagaattgtttcccagctcttgactctcatggatggtcttaaa
tcacgtgcccatgtaattgttattggagccacaaatcgtcccaatagcattgaccctgcc
cttaggaggtttggtaggtttgatcgggagatagatattggcgttccagatgaggttggt
cgccttgaggttcttcgtatacacacaaaaaatatgaagctttctgatgatgttgattta
gaaaggattgctaaggacacacacggatatgttggtgctgatctggctgctttgtgtact
gaagccgcacttcaatgcatcagagagaaaatggacgtcattgacttggaggatgagtcc
attgatgctgagatactaaactcaatggcagtgtcaaatgagcatttccagactgctctt
ggaacaagcaatccttctgctctccgagaaacagtcgttgaagtgcccaacgtcagctgg
gaagatattggtggtcttgagaatgtgaagagagaacttcaagagactgttcaatatcca
gtggaacaccctgagaaatttgagaagtttggaatgtcaccttcaaagggggttcttttc
tatgggcctccgggttgtggtaaaacccttttggcaaaggctattgccaatgaatgccag
gcgaacttcatcagtgtcaaaggtcccgaactacttaccatgtggtttggagaaagtgag
gctaatgtgagggaaatttttgataaagctcgtggttctgctccttgtgttctattcttt
gatgaacttgactctattgcaactcagaggggcagcagcgtaggagatgctggtggtgct
gctgacagggttttgaatcaattgcttacagagatggatggtatgtcagcgaagaaaacc
gtgttcatcattggggccactaatcgaccagacattatagatcctgctcttctgcgaccg
ggccgtctggatcaattgatttatatcccactcccagatgaggattcccgtcatcagata
tttaaagcttgtttgagaaaatctcctgtttcaaaagatgttgaccttagagctctggcc
aagtatactcagggcttcagtggtgcagatatcactgaaatttgccagcgtgcatgcaag
tatgctataagggagaacattgagaaggacattgagagagagaggaggaaaagagataac
cctgaggcaatggaagaggatattgaagaggaagaggtagctgaaatcaaggcagctcat
tttgaggagtcgatgaaatatgcacgaaggagtgtaagtgatgctgacattcgtaagtac
caggcatttgctcagacattgcagcagtcaagagggtttggatccgagttcaggttttca
gataccagcgctggtggtgctggtgcgggcgctgcatcagacccttttgcaagtgctggt
ggagctgatgaagatgatctttacagttag
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