Vigna umbellata (ricebean): 124827393
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Entry
124827393 CDS
T09662
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00900
Terpenoid backbone biosynthesis
vum01100
Metabolic pathways
vum01110
Biosynthesis of secondary metabolites
Module
vum_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124827393
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vum01006
]
124827393
Enzymes [BR:
vum01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
124827393
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
124827393
2.5.1.29 geranylgeranyl diphosphate synthase
124827393
Prenyltransferases [BR:
vum01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
124827393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
124827393
NCBI-ProteinID:
XP_047156395
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRPRDKLCSSSPFTVSAVLTKE
ETVETEEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLC
VAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL
AGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLE
RLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQ
ELGKTAGKDLAADKVTYPKLLGIEKSKEFSAKLNKDAQDQLSGFDPVKAAPLVALANYIA
YRQN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttaattttaacgcatggctacaccccagcttcaccagatccagatcccca
acttttctatttcacggcctcaccaactcccccattccctccttcatcgttaccaaacgc
ccaagagataagctttgttcctcctcgcctttcacagtctccgcagtgctcaccaaagag
gagactgttgagacggaagagaagccggcgtttaacttcaagtcctacatggtccagaaa
gccgacgccgtcaaccaggcgcttgacgacgccgttccgctccgcgagccgctgcggatc
cacgaggccatgcgctactccctcctcgccggtgggaagcgcgtgcgtcccgtcctctgc
gtcgccgcctgtgagctcgtcggaggggccgccgccaccgcgatgcccgctgcctgcgcc
gtcgagatgatccacaccatgtccctcatccacgatgacctcccctgcatggacaacgac
gacctccgccgcggtaagcctaccaaccacaaggtcttcggggaggacgtcgctgtcctc
gccggcgacgcgctcctcgcatttgccttcgagcacatcgccggggccaccgtcggtgcc
tccccccctcgcatcgtccgcgccctcggagagctcgcacgagccatcggcgccgaggga
ctcgtcgccgggcaggtggtcgacatcaagtccgaggggcttgacgacgttggcctcgaa
cgcttggagttcatccatctccacaagacggcggccctgctggaaggcgcggtggtcctt
ggcgccatcctgggcggtggaaccgacgaggagattgagaaattgaggaagtttgcccgg
tatatagggttgttgtttcaggtggttgatgacattctggatgttacgaagtcttcccag
gaattggggaaaactgcggggaaggatcttgcggctgataaggttacttatcccaagctt
ttggggattgagaagtctaaggagttttctgccaaattgaacaaagatgctcaggatcag
ctttctggctttgaccctgtcaaggctgctcctttagttgctttagccaattacattgct
tataggcagaactag
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