Vigna umbellata (ricebean): 124827494
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Entry
124827494 CDS
T09662
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124827494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124827494
03041 Spliceosome [BR:
vum03041
]
124827494
03032 DNA replication proteins [BR:
vum03032
]
124827494
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
124827494
Spliceosome [BR:
vum03041
]
Complex A
U1 snRNP components
Sm proteins
124827494
U2 snRNP components
124827494
Complex B
U1 snRNP components
124827494
U4/U6.U5 tri-snRNP components
124827494
Complex C
U2 snRNP components
124827494
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
124827494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
124827494
NCBI-ProteinID:
XP_047156516
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGIEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
GEILIRCNNVLYFRGVPEDEEIEDAAED
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtaccagttaatcccaagcctttcttgaataatttgactgggaagccagta
attgtgaaactcaaatggggaatagagtacaaggggtatctggtttctgttgattcgtat
atgaacttgcagctggcaaacactgaggagtacattgagggacagtttactggaaatttg
ggagaaattttaatcagatgtaacaatgttctctactttcgaggagtgccagaggatgaa
gaaatcgaagatgcagcagaagactag
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