Vigna umbellata (ricebean): 124827708
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Entry
124827708 CDS
T09662
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124827708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124827708
Spliceosome [BR:
vum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124827708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
Motif
Other DBs
NCBI-GeneID:
124827708
NCBI-ProteinID:
XP_047156780
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEAEILENNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQK
TQRYIDIIQKVEEALKMGSDVSTQGLDLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDFTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK
STLVARVDSIRGDPSGNTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKNKRGGRR
LRKMKERYAITDMRNLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVAQSKLAA
KVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacccttgctgattcttttcttgccgacctcgatgaactctctgataatgaggcc
gaaattctagagaataacgatgttgatgctgctgacatggaagaggatgttgatggtgat
ctggctgacctagaaaacctcaactatgatgacttggacagtgtttccaagttgcagaaa
acacagaggtacattgatattatacagaaagtggaagaggcccttaaaatggggtcagat
gtctccactcagggactggatctagaagatgatcctgaatatcaattgattgtggattgc
aatgctctgtcagttgacattgagaatgaaattgttataatccacaattttattcgtgac
aaatatcgattgaaatttcctgagcttgagtcgttggtgcatcacccgattgattatgca
cgtgttgttaagaagataggaaatgaaatggattttactcttgttgatttagaagggctt
ttaccctcagccattataatggttgtgtctgttactgcttcaactacaactggcaagcct
cttccggaagaagtccttagtaagactgtcgaggcctgtgatcgagcacttgatcttgat
tcagcaaagaagaaagttctagatttcgttgagagtagaatgggctacattgctcccaat
ctctctgctattgttggaagtgctgttgcagctaaactgatgggcacagctggtggtctg
gcatctctagcaaagatgcctgcttgtaatgttcagcttcttggtgccaagaaaaagaat
cttgctgggttctccacagcaacatctcaatttcgtgtaggttacctcgagcaaacagag
atatttcagactactcctccatctctaaggatgcgagcatgtcgactcttggcggcaaag
tctacacttgtagcacgtgtagattccatacggggtgatccatctggaaatactggaagg
gctttcaaggatgagattcacaaaaaaattgagaagtggcaggagccccctcctgcaaag
caaccaaaaccactaccagttcctgattctgagcctaaaaataagagaggtggtcggcgg
cttaggaagatgaaggaaaggtatgcaataacagacatgaggaatttagccaataggatg
caatttggagtcccagaagagagttcattaggagatggtctgggtgagggctatggaatg
cttggtcaggctggcagtggcaaattgcgtgtgtctgttgctcaaagcaaacttgctgca
aaagttgcaaaaagattcaaggaaaagaattatggtagcagtggtgctacatctggtttg
acatcaagtcttgcattcacaccagtgcaggggattgagctgacaaatccacaggctcat
gcacatcaacttggtagcggaactcaaagcacctacttctctgaaacaggaacattttcg
aagattaagaggacatga
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