Vigna umbellata (ricebean): 124828103
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Entry
124828103 CDS
T09662
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124828103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124828103
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124828103
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
124828103
NCBI-ProteinID:
XP_047157285
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MQKMAYTFSFPEEVLEHVFSFIESERDRNAISLVCKSWYEIERWCRRNVFVGNCYAVSPV
MVIKRFPELRSIALKGKPHFADFNLVPEGWGGYVCPWIAAMACAFPCLEEIRLKRMVITD
ESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLKELDLQESEVDDLSGHWLSHF
PDSYTSLVSLNISCLGNEVSLSALERLLGRCPNLRTLRLNRAVPLDRLPNLLRRCPQLVE
LGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSYA
IIQSPDLIKLISQCPNLLRLWVLDYIEDAGLYNLAASCKDLRELRVFPSDPFGLEPNVAL
TEKGLVSVSEGCPRLQSVLYFCRQMSNAALFTIAQNRPNLTRFRLCIIEPRTPDYLTHEP
LDSGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGESDLGLHHVLSG
CDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVID
ERGPPDSRPDDCAVEKLYIYRTVAGPRLDMPGFVWTMEDDSSLRLE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatggcctacacgttctcgtttccggaggaggtgctggagcacgtgttctcc
ttcattgagagcgagagggaccggaacgcgatctctctggtgtgcaagtcgtggtacgag
atcgagcggtggtgcaggaggaatgttttcgtcggtaactgctatgcggtgagccctgtg
atggtgatcaagcggttcccggagttgagatccattgcgctcaaggggaagccgcacttc
gcggacttcaacttggtccccgagggttggggcggttatgtctgtccctggatcgccgcc
atggcctgcgccttcccctgcctcgaagagatcagactcaagaggatggtcatcaccgac
gagagcttggaactcatcgccaagtccttcaaaaacttcaaggtgcttgttctcacttca
tgtgagggtttcaccactgacggactggccgccattgctgccaactgcaggaatttgaag
gagttggacttgcaagagagtgaagtggatgaccttagtgggcactggctaagccatttt
cctgattcctacacgtcactagtgtcactgaacatctcttgcttaggcaatgaggtcagt
ttatctgcactggagcgtctgcttgggaggtgtcccaacctgcggaccctgcgcctcaat
cgtgcagtgccccttgatagactacccaatctacttcgtcgttgtcctcagctggttgag
ttaggcactggagtctactcaactgagatgcgaccagaggtcttctcaaacctggaagcc
gcattttctgggtgcaagcagttgaagagcttgtctggtttttgggacgtcctcccatcg
tacctcccagctgtctaccccatctgctccaggctaacatcgttaaacttgagttatgct
attattcagagccctgatcttattaagcttatcagtcaatgtccaaatttgttgcgtttg
tgggttctggattacatagaagatgctggtctttataaccttgctgcatcatgtaaggat
ttaagggagttaagggtgtttccgtctgacccattcggtttagaaccaaatgttgcattg
acagaaaagggccttgtctctgtgtctgaaggttgcccccggctccaatcagttctatat
ttttgtcgtcaaatgtctaatgcagccctgttcacaattgcgcagaacaggcctaatttg
actcgttttaggctttgtatcatcgagcctagaacgcccgactatcttacgcatgagcca
cttgattctggttttggagccattgtagaacattgcaaggatcttcaacgcctatctcta
tctggtcttcttacagatcgtgttttcgagtatattgggacttacgggaagaagctggag
atgctatctgtggcttttgctggagaaagtgatctgggacttcatcatgtgctgtctggg
tgtgataatcttaggaagctggagatcagggactgcccctttggtgacaaggcgcttttg
gcaaatgctgcaaagctggagacaatgcgatccctttggatgtcctcctgctcagtgagt
tatggagcatgtaaactactgggtcagaaaatgcccagactcaacgttgaagtcattgat
gaaagaggacctccagattctaggccggatgattgtgctgttgagaagctttatatttac
aggactgttgccgggccaaggttggacatgcctggttttgtgtggacaatggaagatgat
tcttcgctaaggcttgagtga
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