Vigna umbellata (ricebean): 124828356
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Entry
124828356 CDS
T09662
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124828356
Spliceosome [BR:
vum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124828356
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
DUF4523
DUF8400
Motif
Other DBs
NCBI-GeneID:
124828356
NCBI-ProteinID:
XP_047157584
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MSTSSQHQFRYTQTPSKVLHLRNLPWECSEEELKELCKPFGKIVNTKCNVGANRNQAFVE
FVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASAARDALDGRSIPRYLL
PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGTVQTAIGPDGKRKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVITAAAARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLPAQGPATAWQNPQAA
PMYPGSAPPYHTQVPGGQVPSWDPSLQAVRPSYISAPGTFPVQTGTVPPMPSYAPAAAMP
AASSPLAQSSPIGHNANPMGISQSGVPPNVNLQPSGAPHSVPGSSPIMQTSQAAQGLVQP
GAQPNARPDGASPPGQHYYA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctcgagccagcaccagttccgatacactcagaccccctcgaaggtgctgcac
cttcgcaacctcccctgggaatgctccgaggaggagctcaaagagctctgcaagcccttc
ggtaagatcgtcaacaccaagtgcaatgtcggcgccaatcgcaaccaggcttttgttgaa
ttcgtagatctaaatcaagccatttcaatggtttcctattatgcttcatcttcagaacct
gctatggttcgtggcaaaactgtttacattcagtattctaatagacatgaaattgtcaac
aacaaaagtcctggagatattcctggaaatgtcttgctggtaactattgaaggtgtggaa
gctggggatgtaagcattgatgttatccatttggtgttttctgcttttggctttgttcac
aaaatcgcaacatttgaaaagactgcaggtttccaggctctgattcagttcactgatgct
gaaactgcttctgctgctagggatgcactggatggaagaagcataccaagatacctactt
ccagcccatgttggttcttgtaatttacgtatttcatactcagcacataaagatctgaat
atcaaattccaatcaaatcgcagcagggactacacaaatcctatgcttcccgttaactat
actgctattgaagggacggtacagacggctataggcccagatgggaagaggaaagaacct
gaaagcaatgtgcttttggcttccattgaaaatatgcagtatgctgttactgttgatgtc
ctccatactgtcttctctgcatttggaactgtccagaaaattgctatatttgaaaagaat
ggtcaaactcaggcactaattcagtaccctgatgtcataacggcagcagctgctagagaa
gctctagaggggcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggctttcagcgacaaaagtagagactatactgtgcca
gatcctagtctgctaccagcccaaggtcctgcaaccgcttggcaaaatccacaggctgca
cccatgtaccctggcagtgctcctccttatcacactcaagttcctggtggccaagtgcca
tcatgggatccatccctccaggcggttagacctagttacatatctgcacctggtactttt
cctgtacaaacaggtaccgttcctccaatgccatcttatgctccagcagcagccatgccc
gcagcttcctcacctcttgcacaaagcagccccattggtcataatgcaaatccaatggga
atctctcagtctggggttccacccaatgtaaatttacagcccagtggtgctccacattca
gttcctggttcctcacctatcatgcagaccagccaagcggctcaaggattagttcagcct
ggggctcagccaaatgcaagacctgatggtgcttcacctcctggtcaacattattatgct
tag
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integrated database retrieval system
