Vigna umbellata (ricebean): 124828565
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Entry
124828565 CDS
T09662
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124828565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124828565
03036 Chromosome and associated proteins [BR:
vum03036
]
124828565
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124828565
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124828565
PBAF complex
124828565
GBAF(ncBAF) complex
124828565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
124828565
NCBI-ProteinID:
XP_047157853
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSVNNNNPSKGIGASSSSFGNAGIPSNSIPANHGFSQSQGQGQIPVGFQGQFPLSQAHAI
VQAQSKAQAQAQAHAQAAAAAHAQIQAHLQAQGLTLNQNQGGGLGSLGLSSAISTPGNAS
GKRIPLKPPIRPVGFSPPNSFSPLRPMELTPASRRKKQKLPEKQLQDKVAAILPESALYT
QLLEFESRVDASLARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPSAEPPTW
TLKIVGRILEDGVDPDQPGVVQKSTPLYPKFSAFFKRVTISLDQRLYPDNHIIMWENARS
PAPHEGFEVKRKGDKEFTVNIRLEMHYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYV
KARKLQNPNDPSFFHCDQPLQKVFGEEKMKFTMVSQKISSHLFPPQPILLEHKIKLSGNS
PVGTACYDVMVDVPFPIQRELSALLANVEKNKEIETCDEAICGIIRKIHEHRRRRSFFLG
FSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAVG
SDAPGST
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacaataataacccttctaagggcattggggcatcttcctcatcctttggc
aatgctggaataccctccaattctatacctgcaaaccatggtttttcacagtcccaagga
caaggccagattcccgttggttttcaagggcagtttccactttcccaggctcatgctatt
gtccaagctcagtccaaggcccaggcccaggctcaggcccatgcccaagcagcagctgca
gcccatgctcaaatccaggctcatttgcaagcacaggggttgactcttaatcagaaccaa
ggtggtggtttggggagtttggggctgtcgtcggctatttccacaccgggtaatgcaagt
gggaaacggatccctctaaaacccccaattcggccagtgggattttcccctcctaacagc
ttctcccctttgagaccgatggagctcacacctgcttcgcggaggaagaagcagaagctt
cccgagaaacagctgcaagataaagtggcagctatattacctgagtctgcactgtacaca
cagcttctagagtttgagtctcgtgttgatgcgtcacttgctagaaagaaggctgacatc
caggaagcgctcaaaaacccaccctgtattcagaaaactcttcgcatctatgtatttaac
acttttgctaatcaaattcgcacaattccaaagaagccgagtgcagagcctccaacctgg
acgctgaagatagttggaaggatattggaagatggtgtagaccctgatcagccaggagtg
gttcagaagtccactcctctgtatccgaagttttcagctttcttcaaaagagtaaccatt
tctttagatcagagactatatccagataatcacattattatgtgggagaatgctcgatca
cctgctccacatgaaggttttgaagtaaagaggaaaggggataaagagtttaccgtgaat
atacgtctggaaatgcattatgtgcctgagaagtttaagctttcaccagctttgacagag
gttcttggtattgaggttgatacccgcccaaggattgttgctgcgatctggcactatgta
aaggccaggaagttgcaaaaccctaatgacccttctttctttcactgtgatcagcctctt
cagaaagtatttggagaagaaaagatgaagtttacaatggtttcgcagaaaatatcttca
catttattccctccacagcctatacttttggaacacaagatcaagctatcgggaaacagt
ccagttgggactgcttgttatgatgtgatggttgatgttcctttcccaattcagagggag
ttgtctgctttattggctaatgtggaaaagaacaaagagattgagacatgtgatgaagca
atatgtggaatcattagaaaaattcatgagcacagaaggagacggtcattctttcttggt
ttcagtcaatcgccagtagaatttattaatgcattgattgaatcgcaaagcagggatctg
aaacttgtttccggagaacctagtcgcaatgcagagaaagagcgtcgatcagatttcttc
aaccaaccatgggttgaagatgctgttattcgatatctgaatcgcaaaccagctgtggga
agtgatgctccaggaagcacatga
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