Vigna umbellata (ricebean): 124828619
Help
Entry
124828619 CDS
T09662
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124828619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124828619
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
124828619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
PDE4_UCR
Motif
Other DBs
NCBI-GeneID:
124828619
NCBI-ProteinID:
XP_047157931
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MDTEEGGHGKGTKVISLIEKATNSTVPEVDPRLLEAIKTVVRYSDSELRVATVTLMDLMK
RDHAQVRYLALLIIDELFMRSKLFRTLVVENMDQLLSLSVGFRRNVPLPAPPAVATVLRS
KAIEFLEKWNVTFGVHYRQLRLGYDYLKNTLRLQFPNIQANVERVRQERMERERRSKEIL
LSKYESLKENSSTIKAGILSTMDEIDECLDILHAKQEECVSDDILDSDEHGDFHSLELQQ
LRLEALKEGEKVYENSDNTVVFDTLRELYKLLVAKHLITIQEWISVLVRVEVADNRFRDS
ILKEFIDIRNRLKSVKSKCEEAGCLLVNSSKHDAEDFWEEGNVVSMESSSSIPNDKNKHL
DAHKMNNGNHGFHSNGSNGSETDSLRHQGHEVESDPERSKLIAEAPVVQWSSYLDNWGSN
RVFMANQRGLELDSHWGRVDADAVIPADKIAELNVHAMPYEEKKVEIQPCLAPLKKGGLC
QRRDMKLCPFHGPIIPRDDKGTPLSQSSLEDVNMDLGTDLVEQLAKQAVKNIRERDQEGA
KKREIDKQSLKRAKLAKIREHNVAVLRDAALASTSRSATLGGDGELTNEDKLSAKDKKQS
LASMLRKKVTSKDRIAEKLLSSRARVASDRQHVSNQDAKYREAFPNQW
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaggaaggagggcacgggaagggaacgaaggtgatatctttgattgagaag
gccaccaactctaccgtgccggaggtcgatccccgtctccttgaggccattaaaacggtg
gttcgatattccgattcggagctccgcgtcgcaaccgtaaccctcatggatctcatgaag
cgcgaccacgctcaggtccggtaccttgcacttctaataattgatgaactcttcatgcgt
tcaaagctttttaggacccttgttgttgagaacatggatcagttgctgagtttgagtgtt
ggattcaggcgaaacgtgcctcttcctgctccaccagctgttgcgactgttttacgttct
aaggccattgaattcttggagaagtggaatgtgacgtttggggttcattacagacagctc
agattgggttatgattatctgaagaatacactcaggctccaatttcctaacatacaagct
aacgtggagcgggttcggcaggagagaatggaaagggagaggaggtcaaaggagatttta
ctgagcaagtatgaatctttgaaagagaattcatctacaataaaggcagggattttatct
acgatggatgagattgatgagtgtttggacattttgcatgcaaaacaggaggagtgtgtg
tcagatgatatattggacagcgacgaacacggtgactttcattctttggagctgcagcag
cttcgtcttgaagcattaaaagaaggggagaaggtttatgagaacagtgataacacagtg
gtttttgacacattgagggagctatacaaacttctggtggcaaagcacttgattactatc
caagagtggatttctgttttagtaagagtcgaagtagccgacaatagattcagagattcc
attttgaaagagttcattgatatccgaaatcgtctaaaatcagttaaaagtaaatgtgaa
gaggctggttgtttgctcgtaaactcatcaaaacacgatgcggaagatttttgggaggag
ggtaacgttgtatctatggaaagctcatctagcatacccaatgataaaaataaacatctt
gatgcccataaaatgaataatggaaatcatggttttcacagtaacgggtctaatggctct
gaaactgacagccttcgtcatcagggacatgaagttgagtcagaccctgagaggagtaaa
cttatagccgaagctcccgtggtacaatggagttcttacttggataactggggttcaaac
agggttttcatggctaaccagcggggtttggagcttgatagtcactggggtagggtggat
gctgatgcagttattccagcagataaaattgccgagctgaatgttcacgcaatgccttat
gaagaaaagaaagttgaaatccaaccatgcctggctcctttgaagaaaggaggattgtgc
cagagaagagacatgaaactttgtccatttcatggacctatcattcctcgagatgacaaa
gggacgccactcagccagagctctttagaagacgtgaatatggatttagggactgatcta
gtggaacagttagccaaacaagcggtgaaaaatattcgtgagagagaccaagagggggca
aagaagagagaaattgataaacagtcgctgaaacgtgcaaaactagcaaaaattagggaa
cacaatgtagctgttttacgcgatgctgctttggcttctacttcacgatcagccacgctt
ggaggagatggggagttaactaatgaagataaactatctgccaaagacaagaaacaaagt
cttgcttctatgctgcgaaagaaagtaacatcaaaagatagaatagccgagaagctttta
agttcgcgtgcaagggttgcttcagataggcagcatgtgtcaaatcaggatgccaaatat
agagaagcgttcccaaatcaatggtaa
DBGET
integrated database retrieval system
