Vigna umbellata (ricebean): 124828873
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Entry
124828873 CDS
T09662
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124828873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124828873
Spliceosome [BR:
vum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124828873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
Motif
Other DBs
NCBI-GeneID:
124828873
NCBI-ProteinID:
XP_047158219
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEAEIPEDNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQK
TQRYIDVIQKVEEALKMGSDVSTQGVDLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSIRGDPSGNTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
RIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcttgctgattcttttcttgccgacctcgatgaactctctgataacgaggca
gaaattccggaggataacgatgttgatgctgctgacatggaagaggatgttgatggtgat
ctagctgacctagaaaacctcaactacgatgacttggacagtgtttccaagttgcagaaa
acacagaggtacattgatgttatacagaaagtggaagaggcccttaaaatggggtcagat
gtctcgactcagggagtggatctagaagatgatcctgaatatcaattgattgtggactgc
aatgctctgtcagttgacattgagaatgaaattgttataatccacaattttattcgtgac
aaatatcgattgaaatttcctgagcttgagtcgttggtgcatcacccgattgattatgca
cgtgttgttaagaagataggaaatgaaatggatttaactcttgtcgatttagaagggctt
ttaccctcagccattataatggttgtgtctgttactgcttcaactacaactggcaagcct
cttccggaagaagtccttagtaagactgttgaggcctgtgatcgagcacttgatcttgat
tcagcgaaaaagaaggttctagattttgttgagagtagaatgggctacattgcgcccaat
ctctctgctattgttggaagtgctgttgcagctaaactcatgggtacagctggtggtctg
acgtctctagcaaagatgcctgcttgtaatgttcagctacttggtgccaagaaaaagaat
cttgctgggttctccacagcaacatctcaatttcgtgtaggttacctcgagcaaacagag
atatttcagactactcctccatctctaaggatgcgagcatgtcgactcttggctgcaaag
tctacacttgcagcacgtgtagattccatacggggggatccatctggaaatactggaagg
gctttcaaggatgagattcacaaaaaaattgagaagtggcaggagcccccacctgcaaaa
caaccaaaaccacttccagttcctgattctgagcctaaaaaaaagagaggtggtcggcgg
cttaggaagatgaaggaaaggtatgcaataacagacatgaggaaattagccaataggatg
caatttggagtcccagaagagagttcattaggagatggtctgggtgagggctatggaatg
cttggtcaggctggcagtggcaaactgcgtgtgtctattggtcaaagcaaacttgctgca
aaagttgcaaaaagattcaaggaaaagaattatggtagcagtggtgctacatctggtttg
acatcaagtcttgcattcacaccagtgcaggggattgagctgacaaatccacaagctcat
gctcatcaacttggtagcggaactcaaagcacctacttctctgaaacaggaacattttcg
aggattaagaggacatga
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