Vigna umbellata (ricebean): 124829031
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Entry
124829031 CDS
T09662
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124829031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124829031
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124829031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124829031
NCBI-ProteinID:
XP_047158411
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MTASIKPLQEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVGVGRSYLKVVDN
GSGITRDGLELVGERYATSKFLNLVDLNVTSENFGFRGEALASISDVSVLEIVTRTHGRP
NGYQKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKCIQSSPNKVLQSIKKCVM
RLALVRPNISFKVVDIEREDELFCTHSASSPLSLITSGFGVEVTSSLHYLEVENDIIKLS
GYVSSPCNTSNIEVLQYVYVNSQFVCKGPIHKLLSQLVVRFEHQNSWTTDNEFRNKKRSR
CHLGIAYLLDLSCPRSMYDLAFEPSKTYVKFKDWTPILNFIEKVIKQFWEENIASAEPSN
QFAYMVEDQQEKAYVSVISDVPDMSRFRNQNRKDCLDLFFSTSDKLIEDDYHQSNREDVR
TSIDYLETAMFKEKQSIGDSLFQTGYSGNLFDDSHAKCISTVTRRQNSLLMHDSSSSLKG
DNFFYSEIPAIESLNDCVAFDAPSCSHGRKFHKEADAISEAFQDDLHYDCNGHSFDVNIN
GDLQKPFLKGCSTPGSILLKKDFFINDGYEIQKDSFISKQNTGGGKDLNDDVPFDEPSSS
HGRKFDKEADMISESFQDDLCYNYNGYSYDVNINGELQKPFLKGCSALGSILSKKDFSGN
DNHELQTDSFCSKQNTGEDYRSGKDLYVHPFPEVKKKLKMSKNFDFLERPLAEENILPSD
LCYSASQIGSSDSDDRSLNFEWHPLYLKPSSQGHALGFYSTTDIKDDIGGVSRCLKWIHH
KNRFDERENECNFSYNTSWNTNQHHCASSYANIGFNFDVAGDSGEIFNKLGDCHDFSDIY
STKRSDMLKKKLDWLLPESCVKRCKLPNKDKGKTEKFRNSTVEENHERSRRSISAPPFYR
SKRRFFSLNHPSEIKAKRQIDRVYNPGFNHEEASNSKDPQQPPVARHESSKDLLLQEFKI
NVKQTSKVLGAMQVNDITEIEELDSFNIQNCAPFGELLSKDVQDPIDYGTKWRNCSPDFT
KNDRPANTQCRNNILDISSGLHLAGDSLIPETISKKCLEDAKVLHQVDKKFIPVVAGRTL
VVIDQHAADERIRLEEMRQKVLSGEAKTVTYLHTELELVLPEIGYQLLHSYSEQIKDWGW
ICNIHANNSETFRRNLDVIKRQETRITLIAVPCILGVKLNDVDLLEFLQQLADTDGSSTV
PPSVIRLLNSKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEAL
HSQIAKLRLMNDSSSKKWHGLRKHKLCVERVAQRLNSAMED
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgacggccagcataaagcctttgcaggaagcagtacgtagttcactgcgttctggcatt
ttcctgttcgacttcacgcgcgttgtcgaggaactggttttcaatagcctcgatgctcgt
gccacaaaggtatcagtgtttgttggtgttgggagatcctatttgaaagtagttgataat
ggaagtggaattactcgagatggtcttgagttggtgggagaaagatatgcaacatcaaaa
tttcttaatttggttgacctgaatgttacgagtgagaattttggtttccgtggggaggct
ttggcttccatttctgatgtctctgtgctggaaattgtgacaagaacacatggaaggcca
aatggatatcaaaaagtgttgaagggttgcaagtgtttatatcttggcattgatgatgat
agaaaggaagtgggcaccacagttgtcgtccgtgatttattttacaatcaaccagttcgg
agaaaatgcatacagtccagtcccaataaggtactgcaatcaatcaagaagtgtgtaatg
cgacttgcacttgtgcgtccaaatatttccttcaaagttgttgatattgaaagagaggat
gaactcttctgcacacattctgcttcttctcctctgtcacttataaccagtggcttcggg
gtagaggtcacaagctctcttcactatttagaagttgagaatgatatcataaagctttct
ggatacgtatccagtccttgcaatacttcaaacattgaggtcctgcagtatgtctatgtt
aactcgcaatttgtttgcaagggcccaattcataagcttctgagtcaactggtggtcagg
tttgaacatcagaactcatggactactgataatgagttccgaaacaagaagagaagcagg
tgtcacctgggtatcgcttatctcttggatttaagttgcccccgatctatgtatgatttg
gcctttgagccatcaaaaacgtatgttaaatttaaggattggacacctattctaaacttc
attgagaaggtcatcaaacaattctgggaggaaaacatagcttctgcagagccctccaat
caatttgcatacatggtagaagatcaacaagagaaagcatatgtcagtgtcatttcagac
gtaccagatatgtcaaggtttagaaaccaaaatcgtaaggattgcctagatctattcttt
tctacttcagacaagctaattgaagatgactatcatcaatctaacagggaagatgttaga
acctccattgattacttggagaccgcgatgttcaaagagaaacaaagtataggagactct
ctttttcagactggttattctggcaacctattcgatgattcacatgccaagtgcatatcc
actgtgacaagaaggcagaacagtttgctgatgcatgatagcagcagttcgttgaaagga
gataactttttctatagtgaaatacctgctatagaaagtttaaatgattgtgtagctttt
gatgcaccgagttgttcacatggaagaaaattccataaagaagctgatgcgatcagtgaa
gcatttcaagatgatttacattatgactgcaatgggcacagttttgatgtaaatattaat
ggggatttgcagaaaccttttctaaagggatgctctactccaggaagtatcctgcttaag
aaagatttctttataaatgatggatatgaaatccaaaaggatagctttattagcaagcaa
aatacagggggtggtaaggatttaaatgatgatgtaccttttgatgaaccaagttcttca
catggaagaaaatttgataaagaagctgatatgatcagtgagtcatttcaagatgattta
tgttataactacaatgggtacagctatgatgtaaatattaatggggagttgcagaaacca
tttctaaagggatgctctgcactaggaagtatcctgtctaagaaagatttctctggaaat
gataatcatgaactccaaactgacagcttttgtagcaagcagaatacaggggaggattat
agaagtggtaaggatttatatgtccatccctttccagaagtaaaaaagaaattgaagatg
tctaaaaatttcgattttcttgaaagaccattggctgaagaaaacattctcccttcagat
ttatgctactcagcatcacaaataggaagctctgactcagatgatcggtcattaaatttt
gaatggcatcctctttacctaaaaccatcatctcaaggacatgcactgggtttttatagt
acaactgatatcaaagatgatattggaggagtatctaggtgccttaaatggatccatcat
aaaaatcgttttgatgaaagagaaaatgagtgcaatttcagctacaatacgtcatggaat
accaaccagcatcactgtgcatcaagttatgcaaacattggatttaattttgatgttgct
ggtgattctggtgaaatattcaacaaattaggtgactgccatgatttcagtgacatatat
tctacaaaaaggtcagatatgttaaaaaagaagctagactggctgttgcctgagtcatgt
gttaaaagatgcaagctgcctaacaaggacaaaggcaaaacagaaaaatttagaaattca
actgtggaggaaaatcatgaaagatctagaagaagcatttcagctcctcctttttataga
agcaaaaggaggtttttctctttaaatcatccctcagaaattaaagctaaaagacagatt
gaccgagtgtataaccctggcttcaatcatgaagaagctagtaattctaaagatcctcaa
cagcctcctgttgctcgtcacgaaagctctaaagatctcttattgcaagaattcaaaatc
aatgtgaagcaaacttcaaaggttctgggtgctatgcaggttaatgacataacagagatt
gaagaacttgacagtttcaacattcaaaactgtgctccatttggggaattgctctctaag
gatgtccaagatcccatagattatgggactaagtggaggaattgctcacctgattttaca
aagaatgatagaccggctaatactcaatgtcgaaacaatatacttgacatttcttccgga
ttgcatcttgctggagattcattgattccagaaactatcagtaagaaatgtcttgaggat
gctaaagttttgcatcaggtggataaaaaattcattccagttgtggctggcagaaccctt
gttgttattgatcagcatgcagcagatgaaagaatcagactggaagaaatgcgtcaaaag
gtattgtcgggagaagcaaaaacagtaacctatctgcatactgaactggaactggtactg
ccagagattggttatcaactacttcatagttatagcgaacagatcaaagattggggctgg
atctgcaacatccatgctaataattccgagacctttagaaggaatctggatgttataaaa
agacaagaaacaaggatcacacttattgcggtaccgtgtattttaggggtcaaattaaat
gatgttgatcttttagaatttcttcagcagcttgctgatactgatggatcatcaacagtg
ccaccctctgtcatacgattgttaaattcgaaagcatgcagaggtgcaattatgtttggg
gattcattgctaccatcagaatgttcccttctagttgaagagctaaagcatacatcgctt
tgtttccaatgtgctcatgggcgaccaacaactgttcctctggtcaacttggaggcactg
catagtcagatagccaagcttcgactgatgaacgactcttcaagtaaaaagtggcatgga
ttacgtaaacataaactatgcgttgaacgtgtagcacaacgtttaaattctgctatggaa
gattag
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