KEGG   Vigna umbellata (ricebean): 124829212
Entry
124829212         CDS       T09662                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vum03041]
    124829212
Spliceosome [BR:vum03041]
 Complex B
  Other components
   Complex B specific factors
    124829212
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Ge1_WD40 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st DUF7165 Beta-prop_HPS5 VPS8_N Beta-prop_IFT122_2nd Beta-prop_LRRK2 zf_topless Beta-prop_IP5PC_F 7TMR-HDED
Other DBs
NCBI-GeneID: 124829212
NCBI-ProteinID: XP_047158629
LinkDB
Position
Unknown
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTALSHTIKFGTKSHAECACFSPDGQFLVSCSVDGFIEV
WDYISGKLKKDLQYQSDEVFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDAIFTSD
GSRVITASSDCTIKVWDVKTTDCIQTFKPPPPLRGGDASVNSVHIFPKNTDHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLEHLM
KVHEKEVIGVTHHPHRNLVATFSEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctaccctcgaaattgaagctcgggatgtcatcaaaatcgtgcttcagttttgcaaa
gaaaattcgttgcatcagacgtttcagacgttgcaaaatgaatgccaggtttctctgaac
actgttgacagcattgaaacctttgttgctgacatcaatagtgggagatgggatgctata
ttgcctcaagtttctcaactcaagcttccaaggaataaattggaggatttgtatgagcag
attgtattagaaatgattgaacttcgagaactggacactgctcgtgcaattttaaggcaa
acacaggtgatgggtgtaatgaaacaagagcagcctgaaagatatttgcgtcttgaacat
ctcctagtcagaacttattttgatccaaatgaggcttatcaagactcaacaaaagagaag
cgacgtgcacaaatagcccaagctcttgcagctgaagttactgtagttccaccatcccga
ttaatggctttaattggtcaggctttgaagtggcagcagcatcaagggttgcttcctcct
ggaacacaatttgatttgtttcgtggaacagctgctatgaaacaagatgtggatgacatg
tatccaacagctctttcacacacgataaagtttgggactaaaagccatgcagaatgtgct
tgcttttcaccagatgggcagtttctcgtgtcatgctcagttgatgggtttattgaggtt
tgggattacataagtggaaagctgaagaaagatctccagtaccagtctgacgaagtcttc
atgatgcatgatgatgctgtgctttgtgtagactttagcagagattcagaaatgcttgca
tctggttctcaagatggaaagattaaagtctggcgtattcgaactggccagtgcttgcgg
cgtcttgaacgtgctcattcccaaggtgtcacaagtgtttccttctctcgtgatggaagc
cagttattaagcacttcatttgacagcacagcaaggatccacggtctcaaatctggaaag
atgttgaaagagtttcgaggtcatacatcttacgtaaatgatgcaatttttacaagtgat
gggagtcgtgttattactgcttcaagtgactgtacgatcaaggtctgggatgtgaagact
acagactgcatacaaacttttaagccacctcctcctttaaggggaggtgatgcttcagtc
aattctgttcacattttccccaagaatactgatcacattgtcgtttgtaacaaaacgtca
tccatatatatcatgacacttcaaggacaggttgtaaagagcttctcatctggtaaaaga
gagggcggagactttgttgcagcctgtgtttcaccgaaaggggaatggatttactgtgtt
ggtgaagacaggaatatctactgcttcagctatcaatctggaaaattggagcatctaatg
aaggtccatgagaaggaagttataggggtcactcaccatccccataggaatcttgttgca
acttttagcgaagactgcacaatgaagttgtggaagccttga

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