Vigna umbellata (ricebean): 124829417
Help
Entry
124829417 CDS
T09662
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124829417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124829417
03036 Chromosome and associated proteins [BR:
vum03036
]
124829417
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124829417
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124829417
PBAF complex
124829417
GBAF(ncBAF) complex
124829417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
C1_2
LpxC
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
124829417
NCBI-ProteinID:
XP_047158875
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MEVTKDPNSNPGRLDDSDPELELYTIPSSSRWFAWDEIHETERTAFKEFFDASSISRTPK
IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFHFLENWGLINYGAPPAADA
EKEEEEEPCKVRLEEGTPNGIRVAATPNSLKPMLLPRGAKTSANATGASLKLPPLASYSD
IYRDLIRQKEGSCGLCGGKCGSGHYRCTQDNFIICANCFKSGNYGEKRSAEDFVLSESSE
NSGKHDTVWTEGEILLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPA
HRNVNVSGANGTVVNNAKQVQSSSSDYQEISKTKDQPPELTKEIEQNGDAVKESPSKRQR
VTPLSDSSGFLMNQVGLISNVVDPHITAAAADAAVSALCDENLCPREIFDVEEDSARDLE
GEGLEMERSSISEIPLPLRVRAATATALGAAAARAKLLADQEVREIEHLVATIIKAQIDK
LLHKVKHFDDLELLMEKEHAEMENLKDSILTERIDVLRRTFRSGITRWKDYSYVKS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcacaaaagatcctaactcaaacccgggtcgcttggacgattcagatcccgaa
ctcgaactctacaccatcccaagctcttcaagatggttcgcgtgggacgaaattcatgaa
acggagagaacagcattcaaggaattcttcgacgcgagctcgatttcgagaacgcccaag
atatacaaagaatacagagacttcatcatcaacaagtacagggaagagccttccaggagg
ctcacattcaccgaggtcagaaaatcgctggttggtgacgtcacgtttctgcacaaggcg
ttccatttcctagagaattggggcttgatcaactacggcgcgccccctgctgcagacgca
gagaaggaggaggaggaggagccgtgcaaagttcgcctcgaagaaggaacccccaatggg
attcgggtggcggccacaccgaactcgttgaagccgatgttgttgcctcgcggtgcgaag
actagtgcaaatgcgaccggggcttctctcaaattgccgccgctcgcctcctattcggat
atttatagggatttgattaggcagaaagaggggagctgtggactttgtggtggcaaatgt
ggttcaggacattaccgttgtacccaggataatttcattatttgtgcaaattgtttcaaa
agtgggaattatggggagaaaaggtctgcagaggatttcgtattgagtgagtcaagtgaa
aacagtggcaagcatgacactgtctggactgagggagaaatccttctccttttggaatct
gttttgaagcatggggatgactgggaactggttgctcaaagtgttcaaaccaagactaaa
cttgattgtatctcaaaactcattgagctgccttttggagagctcatgttgggccctgct
cacagaaatgtcaacgttagtggtgctaatggtaccgtggtgaacaatgcaaaacaagtt
cagtcatcttcatctgactaccaagaaatttcaaaaacaaaggatcaacctcctgagctt
acaaaagaaattgagcagaacggagatgctgtgaaggaaagtccttcaaaaagacagcgt
gttactcccctgtcagattccagtggttttctaatgaatcaggtgggactgatctctaat
gtggttgaccctcatatcacagctgctgcagctgatgctgctgtttcagctctttgtgat
gagaatttgtgtccaagggagatatttgatgttgaagaagattcagcaagagatcttgag
ggagaaggtttagagatggagaggtcctctatatcagaaatacctttgccactgcgtgta
agagccgccactgcaactgctcttggagctgctgctgctcgagcaaagttgttggcagac
caggaagtcagagagattgaacatttagtggcaactataattaaagctcagatcgataag
ttgctgcacaaggttaaacattttgacgatctggagctgttgatggaaaaggaacatgct
gaaatggaaaacttaaaagattctatcttgaccgaacggattgatgtgttaaggagaaca
tttagatctggaatcactagatggaaggattattcgtatgtaaaatcttag
DBGET
integrated database retrieval system
