Vigna umbellata (ricebean): 124829513
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Entry
124829513 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124829513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124829513
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124829513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
124829513
NCBI-ProteinID:
XP_047158991
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MVGKDNLRAEDLNLCFERLMMVAGSGNSEKGVNLKVGVITEWKDIPVELLMQILSLVDDQ
TVITASGVCRGWRDAIYFGLARLSLSWCSKNMNNLVLSLIPKFTKLQTLILRQDKPQLED
KAVETIAECCHELQILDLSKSFKLTDRSLYAIALGCRDLTKLNISGCSAFSDSALAYLAS
FCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQXLNLGWCDNVGDVGVTTLAYGCPDLRI
VDLCGCVRITDDSVIALANRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRISVKGGNDE
DGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHRV
FTHFPHPAH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaaggataatctgagagctgaggacttgaacttgtgttttgagagacttatg
atggtggctgggagtgggaacagtgagaaaggggtgaacttgaaggttggggtgattacc
gagtggaaggatattcctgtggaacttttgatgcaaattttgtcccttgtggatgatcag
acagtgatcaccgcttctggagtttgtcgtggctggagagatgctatctactttggcctt
gctcgtttatcactatcatggtgtagcaagaacatgaataacttggtcctatcacttatt
cctaaattcacaaaattgcaaactctaatccttcgtcaagacaagcctcaactagaggat
aaagctgttgagactattgcagagtgctgtcatgaattgcagattctggacctcagcaaa
agcttcaagctaactgatcgttcactttatgctattgcattaggttgtcgcgatctcaca
aaactcaacatcagtgggtgttcagcatttagtgacagtgctctggcttaccttgccagt
ttctgcagaaaactaaaagttctaaatctttgtggatgtgttagagctgcatctgatact
gcattgcaggccattggacagtactgcaatcagctacaanntctgaaccttggatggtgt
gataatgttggtgatgttggagtgactactttagcatatgggtgccctgatcttaggata
gttgacttgtgtggctgtgtccgtataacagatgatagtgtgattgctttggctaacaga
tgcccacatctgaggtctcttggactgtactactgcaagaacatcacagacagagcaatg
tattctttggcacacagcaaggtgaataacaggatatctgtgaaaggaggaaatgatgag
gatgggttaaggacattgaacataagccaatgcactgcactcaccccatctgcggttcaa
gcggtttgtgattcattcccatcactccacacatgctcagggaggcactcactcataatg
agtggctgcctcaacttgacctctgtgcattgtgcctgtgctgtccatgcacaccgtgta
ttcacccatttccctcatccagctcattaa
DBGET
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