Vigna umbellata (ricebean): 124829681
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Entry
124829681 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124829681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124829681
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124829681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
FapA
ATG17_like
DUF6306
Motif
Other DBs
NCBI-GeneID:
124829681
NCBI-ProteinID:
XP_047159194
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MAGFSFGSSASSSTQSSSSFSFTNTSSSSSSSSPFSFLSSSGPAFSFGSSSLFTTPTNPT
TAASSIFSTSSSASPLFSSSTPATTPFGTSSSSTLTTSFGAASSSTPTLFGAASSGAMTT
PPFGAPSPPSTTLFGAASPAPTTQFGGTPSASTPLFGGTLSASTPLTGVTPSASTPSFFT
TAFGGTASASTPAFEGNASASTPAFGGTSPSFIPAFGVTPLASNTEFGGASLASTAPIAS
STSTTLFGAASSAPSTSTTPASSASTTSFGASTASASPFGGSSPSLYGATSSSFGSTTSS
SSTAAFGASSSASSLFAGSSPAATTPFGALAVSSASSASASSSPLFPGVFATGPSSTSTS
TTIPGFAKPSASATTTTVSSSSSGLSFASQPSFGFPNAASATASSSASSAASGALASKPP
GSFSFTTSSAPLFSTVTTTTTSTVATGSTTLSSSVPAFGATTASSATPSTLAVPAASTGA
APSASTGSSFTGFGVGSTASNVSLGTGFSFKSSTTTVSTATTSAFAVSTTTSTSAILGSS
TSATQASSAVVVASTTGTTSTVSTSVTAAPKLPSEITGKTVEEIIKEWNAELQERTGKFR
KQANAIAEWDRRILNNRDVLLRLEIEVAKVVETQSNLERQLELIETHQQEVDKALQSMEE
EAERIYKDERGLLLDDEAASTRDAMYEQSELIERELEQMTEQIKSVIQSLNSNQGGELDT
LDGMTPLDAVVRILNNQLTSLMWIDEKAEEFSSRIQKLANQGSASNREPTGPGIWMS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttctccttcggatcttctgcctcttcttcaactcaatcttcgtcttccttt
tccttcacaaacacttcttcttcttcctcctcctcttctccattttcatttctttcatcc
tccggtcccgcgttctctttcggatcctcctctctcttcaccactcccacaaaccctacc
accgctgcctcttcaattttcagtacctctagctctgcctcacccctgttctcctcttcc
acccccgcaaccacaccgttcgggacttcttcctcttctacattgaccacgtcgtttggg
gcagcttcctcttccactcccacgctgtttggggctgcttcctccggggcgatgacgacg
ccgccgtttggagcaccttcccccccttcaacaactctgtttggcgcagcctccccagct
ccaaccactcaatttggtggaacaccctcagcttcaactcctctgtttggtggaacactc
tcagcttcaacgcctctaactggtgtaacgccctcagcttcgactccgtcgttttttact
acggcgtttgggggaactgcctcagcctcgactccggcatttgagggaaatgcttcggcg
tcgactccggcgtttggtggaacgtcaccatctttcattccggcgtttggtgtaacaccc
ttagcctcgaatactgagtttggtggagcatcattagcttccacggcgccgatagcgtca
tccacttcaacgaccttgtttggtgcagcctcctcagcgccttcaacatcgacgacgccc
gcatcctcagcctcaacgacatcgtttggagcgtcaactgcttcggcgtcgccgtttgga
gggtcctccccatcgctctacggagcaacatcatcttcatttggctcaacaacatcctct
tcctcaacggcagcttttggagcatcttcttctgcctcatcgctgtttgcaggatcatcc
ccagcagcaacgacgccgtttggagcgttggcagtttcttcagcttcctcagcctctgca
agcagctctcctttgttcccaggtgtgtttgccactggaccctcttcgacttcgacctca
acgacgatcccagggtttgcaaagccgtctgcatcagctactactacaacggtgtcatct
agctcttcgggactctctttcgcttctcaaccctcttttggatttcccaatgctgcttca
gctacggcttcttcttcagcttcttcggcggcttctggcgcattggcttcaaaaccaccg
ggttctttttcgtttaccacatcttcggcgccgctgttctcgactgtgacgaccaccacg
acttctacagtggctactggcagcacgaccctttcatcttctgtgcctgcctttggtgct
actactgcatcttctgctacaccgagtactttggcggttcctgctgcttctactggtgca
gcaccttctgccagtacaggatcatcttttacaggatttggtgtaggaagcacggcatcc
aatgtttctcttgggactgggttttcctttaagtcatcaacgacgacagtttctaccgct
actacttctgcatttgcggtgagcactacaacctctacttcagcaattttgggttccagc
accagtgcaactcaggcatcatctgctgttgttgtggcttctactacgggaactacttca
actgtcagcacttcagttactgctgcaccaaaattgccgtctgaaatcactgggaagact
gttgaagagattatcaaggagtggaatgctgagttgcaagagcgaactggaaagtttaga
aaacaggcaaatgcaatagctgaatgggatcgcaggattttgaacaatcgtgatgttcta
ttgaggcttgagattgaagtggcaaaagtagtcgagacacaatcaaatttggaacggcaa
ttggagttgatagagactcatcaacaggaggttgataaggctttacagagtatggaggaa
gaagctgaacgtatttacaaggatgaacggggtttgcttcttgacgatgaagctgcatct
acaagagatgcaatgtatgagcaatctgaattgattgaaagggaactggagcagatgact
gaacaaattaaatcggttatccaatcccttaattcaaaccagggtggagaacttgatacc
cttgatggaatgactccattagatgcagtagttcgaattttaaataatcaactaacttct
ctgatgtggattgatgaaaaggctgaagagttttcttcccgtattcagaagctagctaac
caaggttctgcttcaaatcgtgaaccgacgggtccaggaatctggatgtcttga
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