Vigna umbellata (ricebean): 124830074
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Entry
124830074 CDS
T09662
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00500
Starch and sucrose metabolism
vum01100
Metabolic pathways
vum01110
Biosynthesis of secondary metabolites
Module
vum_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124830074
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vum01003
]
124830074
Enzymes [BR:
vum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
124830074
Glycosyltransferases [BR:
vum01003
]
Polysaccharide
Storage polysaccharide
124830074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
DUF6161
Motif
Other DBs
NCBI-GeneID:
124830074
NCBI-ProteinID:
XP_047159651
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MGTLFFFHPPIPRLQLPSVPKPVAFPPISCLRNNGDVSGFHEHKSEGNKNVDISQTISND
GQNVKQDNIWQLFKEAQQNILYLNDQRLGAIKELEKTNREKHSLLEKIKKLEAEKQAGAG
KDNQSTCSELLLRIDAMVLSSMISPGEASELRSLVINHKVSLADVFNIISRKKDPELLGQ
LRHFSHGHKKNGFHIVHICTEMTPMVPRGSVASYVTGISRALQRKGHLVEVILPKYASLN
LNEVQGLREVNVEAYSYFNGQLHGNKIWTGVVYGIGVTLIEPKYFSSFFNREMIYGYPDD
FERFSYFCRASLDYIVKCGKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTKILFTCHGF
NSQEGIEQPDKLALCGLDPLRLHRADRLQDNTNTQLVNILKGGIIYSNKVVIMSSIHQKH
VIVHNLSHELEPTLNEHRDKLVIAPYGLDRSTWDPSTDYLLPENFNAENFNGKAVCKVSL
LQQLGLSEHSSSILVGFIFPEGRDLDVKRLKEVILNAKQQDVQFIFLGTSERSVLNQTLE
SLQKELKDDNLKLFPTYDEALLHLVFAGSDIILCQSFVDPTDEIPLIALRYGAAPIALTS
DASTNRVIPFERNFTNQDHEATMYSKLINSSFLNISLGLAVDEIRTNPAMWKRKIMQAMA
HDLSWDGECYDLHFAAYSAIKNM
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggggacattgtttttcttccatccaccgattcctcgtcttcaactcccttccgtgcca
aaacccgttgcattccctcctatttcttgcctgaggaataatggagatgtcagtggcttt
catgaacacaagtcagagggtaataaaaatgtggacatatcccagacaatatctaatgat
ggccagaatgtgaaacaagataatatttggcaattgttcaaagaagctcaacagaacata
ctgtacttgaacgaccaacgtcttggggccattaaggaacttgagaaaacgaatagagaa
aaacactcgctactagaaaagataaagaaattggaagcagaaaagcaggctggtgctggt
aaagataatcaatcaacttgttcagagttgctgcttcggatagatgccatggtccttagc
agcatgattagccctggagaagcatctgaattaagaagtttggtgattaatcacaaagtg
agtctggcggatgtttttaatatcatctcacgcaaaaaagatcccgaacttctaggacaa
cttcgtcacttttcacatggacacaaaaagaatggttttcatattgttcacatttgcaca
gaaatgacgccaatggtccctagaggatcggtagcttcatatgtgactggcatatctcgt
gcacttcaaagaaagggtcacttggtggaagttatattgccaaagtatgcaagtttaaac
ctcaatgaagtgcaaggattgcgtgaagttaatgtagaggcttactcatattttaatggt
caattgcatggaaataaaatttggactggtgttgtttatggcattggagtcactttgatt
gaaccaaagtacttttcatcgtttttcaatcgtgagatgatatatggctatccagatgat
tttgaaaggttctcctacttttgtcgagcatcattggattatattgtaaaatgtgggaag
cagcctgatgtattacatattcataattgggagactgccatagttgggccccttttctgg
gatatatttgttaaacagggacttgaaggaaccaaaatattatttacatgccatggcttc
aattcacaggagggtattgaacaaccagataaattggccttatgcgggcttgatccttta
cgacttcatcgcgctgatcgtttacaagacaacactaacacacaactagtcaatatttta
aagggtggaattatctattcaaataaagttgtaataatgtcgtctatccatcaaaagcat
gtaattgttcataatctgagtcatgaactggaacctactttaaatgagcatagggacaag
ttggtcattgctccttatgggttagacaggtcaacttgggatccttcgacagactatctt
cttccagaaaatttcaatgctgaaaatttcaatggaaaagctgtttgcaaagtttcattg
ctgcagcagctggggttatctgaacattcttccagtattcttgttggattcatttttccg
gaaggacgagacctggatgtgaaaaggctgaaggaagttatcttgaatgccaagcaacag
gatgtccagttcatatttttggggaccagtgaaagatcagtcttgaatcagacccttgaa
tcgcttcagaaggaactcaaggatgataatcttaaactttttcctacttatgatgaagct
ctgttgcatttagtctttgctggatcggacatcatcttgtgccaatctttcgttgatcct
actgacgaaatccctctcatagcattaaggtatggagcagctccaatagcacttacctct
gatgcaagcacaaacagggtgataccttttgaaaggaacttcacaaaccaagaccatgag
gctaccatgtactcaaaattgatcaactctagctttttaaacatctctctcggccttgct
gttgatgaaattaggactaaccctgcaatgtggaaacgaaaaataatgcaagcaatggca
catgacttatcatgggatggtgaatgctacgatcttcattttgcagcttactctgctata
aagaatatgtaa
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