KEGG   Vigna umbellata (ricebean): 124830167
Entry
124830167         CDS       T09662                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vum04812]
    124830167
Cytoskeleton proteins [BR:vum04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     124830167
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_DCAF4 eIF2A Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 124830167
NCBI-ProteinID: XP_047159766
LinkDB
Position
Unknown
AA seq 826 aa
MAKRGYKIQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPTSLMSLSGHTSP
VESVAFDSAEVLVLGGASTGVIKLWDLEEAKMVRTVAGHRSNCTAVEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGLDNVVKVWDLTAGKLLHDF
KFHEGPIRSIDFHPLEFLLATGSADRTVKFWDLETFEMIGSARREASGVRSIAFHPDGRT
LFTGHEDSLKVYSWEPVICHDTVDMGWTTLGDLCIHDGKLLGCSFYRNSVGIWVADISLI
EPYGAGLDPKKNEVTEQKHDLQNSKLEKVEVNERPTSGLRSMSPDESKEIKNIYIDSSGG
RPFTLPRSGSLSSEKVDLPEEFKEICNLGTIKQSPLTGVRVKSNEQAIRKSFIAPNIVPR
DVPEGKVSAKSEKETITFSKTKPGMLLKPAHVRRASTGRFDVDRFSEDMKSGTFCDPAIK
LDSTKEPKFQTNLGPPNEVKESCEDKHPIKSVTDKFDKILSPSRFSDQKKCDKSSPHKEE
SSPVKYVNGVAVVRGRTRSLVERFERREKIQIDEDQTNEFLPTINETREEVHQEDQIKAS
PTVTIVCEKREKTPLIEDQNNLPSVPKTTILETDKSNDPLKVEPQISIRHSNSANEEEII
EGLMQTHDVTLSNLRSRLTKLQVVRHFWERNDIKGATSALRKLPDQSVQADVISVLVEKM
EIFTMDLFSCLLPVLTGLLDSKIERHVKVSLDMLLKLVAVFGPTIRATVSAPPSVGVDLH
QEERRECCNQCFMELQKIQMILPILIRRGGLLARSALELNLVLQQS
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggcaaagcgtggatataaaatacaggaatttgtggctcattcggcaagcgtcaattgt
ttaaatatcggaaagaaagcatgccgtcttttcattactggaggtgatgatcacaaggtc
aatctttggacaatcgggaagccaacttcactaatgagcctatctggtcatactagtcca
gttgaatctgtcgcatttgactcagcagaagttttagtacttggtggagcatcaactggt
gtgataaagctttgggatttggaagaagctaagatggttcgcacagttgctggacacaga
tccaattgtactgctgttgagtttcaccctttcggtgaattttttgcatctggctccatg
gacactaatctaaagatttgggacataagaaaaaaaggatgtattcatacgtacaagggt
catagccagggcatcagtactatcaaatttactccagatggccgttgggttgtttctggt
ggattagataatgttgtgaaggtgtgggatctaacagctgggaagctcttgcacgacttc
aagttccatgaaggacccattagatcaatagatttccatccgcttgaatttcttctggct
acaggttctgctgatagaacagtgaaattctgggatttagaaacctttgaaatgattgga
tctgccaggcgtgaggcttctggggtacgctcaatagcttttcatcctgatggaaggacc
ctatttactggacatgaagatagtttgaaggtgtattcatgggaacctgtgatatgtcat
gatactgttgatatgggatggacaacacttggtgatctttgtattcacgatgggaaactt
ttggggtgctcattctaccggaattctgttggaatctgggtagcagatatatcgcttatt
gagccatatggtgctggcttggatcccaaaaaaaatgaagtcacagaacaaaaacatgat
cttcaaaatagtaaactagagaaggttgaagttaatgaaagaccaacctctgggttgcgc
agcatgtctcctgatgaatcaaaggagataaagaatatatatattgactcttctggaggg
agaccttttactttaccgaggtcagggtctttaagttctgaaaaagtagatctcccagag
gaattcaaggaaatttgcaacttgggaacaatcaagcagagtcctctgacaggagttcgt
gtaaaatcaaatgaacaagcaattagaaaatctttcattgcaccgaacattgtacctcgg
gatgttcctgagggtaaagtctcagcaaaatctgaaaaagagaccatcaccttttcaaag
actaagcctggaatgttactcaaaccagctcatgtacggagagcatccactggcagattt
gatgttgataggttttcagaagatatgaagtctggaaccttttgtgatcctgcaattaaa
ttagacagcacaaaagagcccaagttccaaacaaatctgggacctccgaatgaagtcaaa
gaatcgtgtgaagacaaacatcctatcaagagtgttacagacaagtttgacaagattttg
tctccgagtagattttccgaccaaaagaaatgtgataaatcctcacctcacaaggaagaa
agtagtccagttaaatacgtcaatggagttgctgttgtacgaggaaggacccggtcattg
gttgaaaggtttgagagacgggaaaagattcaaattgacgaagatcaaactaatgaattc
ctccccacaataaatgaaacgagagaagaagttcaccaagaagatcaaataaaagcatct
cccacagtcaccatagtatgtgagaagagagaaaaaactcccttaattgaagatcaaaac
aatctgccctctgttcccaagacgacaatattggaaactgataaatctaatgacccactg
aaagttgagcctcaaatctctatacggcattcaaactctgcaaatgaggaagaaatcatt
gaaggtctgatgcaaactcatgatgtaacattgagtaatcttcgctcacgcttgacaaag
ttacaggttgtgcggcacttttgggagcgcaatgatattaaaggcgctaccagtgctctg
agaaagctgccagatcaatctgttcaagcagatgttatcagtgtccttgtggagaagatg
gagattttcaccatggatttattttcttgcttacttcctgtgctcacaggcttgcttgat
agcaagatagaaagacatgtcaaggtgtcactggatatgctgttgaagcttgtagcagtt
tttggtccaacaatacgtgcaactgtttcagcacctccctctgttggtgttgatctacat
caagaggaaagacgagaatgctgcaaccagtgctttatggaactgcaaaagatccaaatg
atccttccaatactgatacggaggggtggactattggccaggtctgccctagagttaaat
cttgtccttcagcagtcctaa

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