Vigna umbellata (ricebean): 124830244
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Entry
124830244 CDS
T09662
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124830244
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124830244
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
90S particles
Helicases
124830244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124830244
NCBI-ProteinID:
XP_047159856
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MANDSSFLFSGIRFNRKKFGADIARFQKKDNDTDSAKIWSVADDGRAKTREAVEEKTAST
KKRKRKGNSSENVEGFNVFRNSASVAQSSGEVQADQESIEFSKRKNKKEQNRQLERDAIF
RKQHNIHVSGYNVPSPLQSFDELKSRYKCPSYLLRNLKELGFREPTPIQRQTIPVLLDGR
ECFACAPTGSGKTLAFVCPMLIKLKDPEKGGIRAVILCHTRELSAQIFRECKKLAKRKKF
GIKLMTKSLLRNADFSKFPCDILISTPLRLRLAIKKKKIDLSRVEYLVLDESDKLFEPEL
FKQIDSVLKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLI
FTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSEQER
GNAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHRIGRSGRAGRSGE
AITFYTEEDIPLLRNVANLMAASGCEVPPWLMELQKKKWKKHRPKRDSISTKPDL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgactcttcgtttttgttttctggcattcgtttcaacagaaagaagttcggc
gccgatatcgccagattccagaaaaaagataacgatactgattcggcgaagatttggagc
gttgccgatgacggaagggcgaaaacgagggaagcagtagaagaaaaaacagcgtccacg
aagaagaggaagcgcaagggaaactcttctgaaaatgttgaaggattcaatgtgtttaga
aattccgcatctgtggcgcagtccagtggtgaagttcaagctgatcaggagtctattgag
tttagtaaaaggaagaataagaaggaacaaaatcgacaactcgagcgggacgcgatattc
agaaagcagcacaacattcatgtctctggttataatgtaccgtctcctcttcaaagcttt
gacgaattgaaatcaagatataagtgtccatcgtatttgttgcgcaacctgaaggagctt
ggattcagagaaccaacgcctattcaaaggcagactattccagtacttttagatggtcga
gagtgctttgcttgtgcaccaactggttctgggaaaacccttgcatttgtatgtccaatg
cttataaagcttaaggacccagaaaagggtggcattcgagctgttatcctttgtcatacc
cgtgaattatctgctcaaatatttcgagagtgcaaaaagcttgctaaaagaaaaaagttt
ggtattaagttaatgactaaaagtctcttaagaaatgctgatttttcaaagtttccatgt
gatatactaatatccacaccactccgattacgattggctatcaagaagaagaagattgat
ctcagcagagtggagtaccttgtcctggatgaatcggataagctttttgagcccgaatta
ttcaagcagattgattctgttctcaaggcatgctccaacccctcaatcattcgctcactt
ttcagtgctactttacctgattttgttgaagatcgagctcgagaacttatgcacgatgct
gttcgtgtaattgttggcaggaagaatatggcttctgaaacaataaagcaaaaattgatt
tttactggaagtgaagaaggaaaacttcttgcaattcgtcaaagttttgcagagagtcta
aatcctccagtattggtctttctccaaagcaaggaacgagccaaggagttgtacggtgaa
cttgcatttgacaacattagagttgatgtcattcattctgatttgtctgaacaagagcga
ggaaatgctgtcgacaacttcagagctggaaaaacatgggttttgattgctactgatgtg
gttgcccggggcatggatttcaaaggagtgaactgtgtgatcaattatgatttccctgat
tctgcctccgcatacgtccacagaattggtcgttctggcagagcggggaggagtggagaa
gcgattactttttacacagaggaagacattccattgctgcggaatgttgctaatctaatg
gcagcatcgggctgtgaagttccgccctggctcatggagttgcaaaaaaagaagtggaag
aagcaccgtcccaaaagagattcaatctcaacaaaaccagacctgtaa
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