Vigna umbellata (ricebean): 124830265
Help
Entry
124830265 CDS
T09662
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00300
Lysine biosynthesis
vum00470
D-Amino acid metabolism
vum01100
Metabolic pathways
vum01110
Biosynthesis of secondary metabolites
vum01230
Biosynthesis of amino acids
Module
vum_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
124830265
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
124830265
Enzymes [BR:
vum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
124830265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
124830265
NCBI-ProteinID:
XP_047159886
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MAGSHLLSHSHSLPKTYNHSFNQNPLSQKLLLPFKFKATLRPRALRAVLSQKAAQTAVED
SKKAPFQHCFTKSEDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYRNALEGLN
SIIGYAIKANNNLKILEHLRHLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKILEDLV
LAAQAGVFVNIDSEFDLENIVEAAKRAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGI
RNEKLQWFLDVVKEHSNELKLVGAHCHLGSTITKVDIFRDAATIMINYIDQIRAQGFEVD
YLNIGGGLGIDYYHSGAILPSPRDLIDTVRDLVISRGLNLIIEPGRSLIANTCCLVNRVT
GVKTNGSKNFIVIDGSMAELIRPSLYDAYQHIELVSPAPSNAEKATFDVVGPVCESADFL
GKERELPTPAKGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSVSKIRHGETFEDH
VRFFEGL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcacaccttctttctcactctcattcccttcccaaaacctataaccactcc
ttcaaccaaaaccctttatctcaaaagctacttctacccttcaaattcaaggccaccctc
agaccgcgtgctcttagagctgttctctcccagaaagctgctcaaaccgcggtagaggac
tcaaagaaggctccttttcagcactgtttcaccaaatccgaagatgggtatctgtactgt
gagggcctcaaggtacatgacatcatggaatctgttgagagaaggcctttctatctttac
agcaagccccagataactaggaatgttgaagcctataggaatgcattggaagggttgaac
tctataattgggtatgccattaaggccaacaataacttgaagattctggaacatttgagg
cacttgggctgtggagctgtgcttgttagtgggaatgagcttagattggctcttcgtgct
ggctttgatcccacaaggtgtatctttaatgggaatggtaaaatcttggaggacttggtc
ttggctgcccaggcaggtgtgtttgtcaacattgatagtgagtttgacttggagaacatt
gtagaggctgcaaaaagggccggaaagaaggtcaatgttttacttcggattaatccggat
gtagatccacaggtccatccttatgttgctactgggaataagaactctaaatttggcatt
agaaatgagaagctgcaatggttcttagatgtagtgaaggagcattctaatgagctcaaa
ctagtaggggcccactgccatctcggttcaacaatcaccaaggtagacattttcagggat
gctgccaccattatgatcaactacattgatcaaatccgagctcagggttttgaagttgat
tatttaaatattggaggaggacttgggatagattattatcattctggtgccatccttcct
tcacctagagatctcattgacactgtacgagatcttgttatttcccgaggtcttaatctc
atcattgaaccagggagatcactcattgctaacacatgttgcttagttaaccgggtgaca
ggggttaaaactaatggatctaaaaacttcattgtaattgatggaagtatggcagaactt
atccgccctagtctctatgatgcttaccagcatatagagttggtttcccctgccccatca
aatgctgagaaagcaacctttgacgtggttggcccagtctgcgagtctgcagatttctta
ggaaaagaaagagaacttcctactccagccaagggtactggtttggtcgttcatgatgct
ggcgcttattgcatgagcatggcatcaacatacaatctaaagatgcggcctcctgagtat
tgggttgaagatgatggatcagtgagcaaaataagacatggtgagacttttgaagaccac
gttcggttttttgagggcctttga
DBGET
integrated database retrieval system
