Vigna umbellata (ricebean): 124830666
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Entry
124830666 CDS
T09662
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124830666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124830666
Enzymes [BR:
vum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124830666
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124830666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124830666
NCBI-ProteinID:
XP_047160396
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MVLYTESATNSVKAVAFSFLTSDDLQRSSLVKITNPILLNALLHPVPGGLYDPAMGPLDD
KSLCKSCGQASKLCPGHFGHIELVSPVYNPLMFNILSSIIQRTCFSCYHFQASRKEVDMR
TTQLELIMKGDIIRAKSLDSINLDEFTHSGDGDESHHCSAEQQGENWTSLQFSEAMSILK
KFLKRQYKKCQNCGVVNPKISKPTFGWFHMNVLSADAARANTIRVVESEINNDDMSLGGG
ETTEEEDISSVGAVKRDKRKKGNLSHKLAAQNKLSGSLLPSQAKGILELLWENEARLCSY
ISDIQDQGFGKKAGHSMFFLENIFVPPIKFRPPAKAGDDVMEHPQTVLLTKVLQGNISLG
EAHINKLDPSKVLSRWMDLQQSVNLLFDSKTASGQRDVAAGICQLLEKKEGIFRQKMMGK
RVNFACRSVISPDPYLAVNEIGIPPYFAIRLSYPERVTPWNAMKLRNAILNGPDSHPGAT
HYSDKQATVKLQRSPKLLAMISRKLPSSRGVILDQGKISDQEFEGKVVYRHLKDGDVVLV
NRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYN
IVNANNQYVKPTSGDPIRALIQDHIVSASLLTKKDTFITYEEFNQLLYSSGVSMAGVGSF
SGKHGQKVFMTNSECEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTVEKNAKIP
SNFFKTQVREGERYTRDKSRDKDLPDEDKLLIYKNNLVRGVVDKAQFGDYGIIHTVQEFY
GSNVAGNLLSALSRLFTSFLQMHGFTCGVDDLMIIEEKDVERMNQLSSCEEIGDIVHREF
IGVMNGDNIDTTTMQLNIEKKVRSNGEAALTYLDRKMISNLNSRTSSGILKELLSEGILK
PSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRA
GGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTV
RDADGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRQLDRSSPYINKLPDAL
KGKAENFFRDSLKQRNLGLKRRDLLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTL
NTFHLAGRGEMNVTLGIPRLQEIVMAASRDIKTPFMTCPLRPNKSMEDAICLADKLKKIT
VADIIKSMKVSVVQVTVHAGQVCSIYKLVMKLYKPKQYPKYTDITLEDWEDTLRVFFVRE
LEDAIESHMALLSKISGIKKFKTDPQSNYSNSSEDGHGNESESETKGKNKDDDDDDGVVE
DTEGYEDLGSDAQKRKRQGTDEVDYEDGPEEEMHDGEQSEETENDEDGSDVDVNENDNDM
TLDANNSQGLEKSSKFKPIVEKNSLKREKKKSKAITKKYDRAVFVKAKGMHFEIHFKFTG
EPHILLAQIAQRTAKKVCIQNFGRVGECKAITCKESGVIYYGEDGRNRDDIPASMKEKIP
ALQTSGIHFKTFWELQDDLDVRYIYSNSVHAMLSAYGVEAARETIIREVQNVFKSYGISV
NIRHLTLIADFMTHSGGYSPMNRTGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLET
PSSRICLGLPVKVGTGCHDLIQKLEI
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctacaccgagagtgcgacgaattccgttaaggcggtggcgttcagcttttta
acgagcgacgacttgcagcggagtagtctagtgaagataacgaatccgattttgctaaat
gctttgcttcaccctgtgcctggtggactatacgatccagctatgggcccgctggatgac
aagtccctttgtaagtcatgtggtcaagcttctaaactttgcccaggtcattttggtcat
attgaacttgtttctcctgtctacaatcctttgatgttcaatattcttagcagtattata
cagagaacttgtttctcttgctatcattttcaagctagcagaaaagaggtggatatgcgt
actacccaattggagctcataatgaaaggggatattatcagggccaaaagtttagactct
attaatttagatgaattcacacactcaggtgatggtgatgagagccaccattgtagtgcc
gagcaacagggagaaaattggacctcccttcaatttagtgaggcaatgtctattctaaag
aagtttctgaagcgacaatataaaaagtgtcaaaattgtggagttgtaaatcctaaaatc
agtaaaccaacctttggatggtttcacatgaatgtcctttctgctgatgcggctagagca
aataccatcagagttgtggaaagtgaaataaacaatgatgatatgtctttaggtggtggg
gagactacagaggaagaagatatatcatctgttggggctgttaaaagagataaaagaaaa
aaggggaatttgtctcacaagctagctgcacaaaataaactttctgggtcgttgctacca
tcacaggctaaaggtattttagagcttttgtgggaaaacgaggccagactctgctcttat
atcagtgatattcaagatcaggggtttggaaagaaagctggtcactcaatgttctttcta
gagaatatttttgtgccaccaatcaaattccgacccccagctaaagcaggtgatgatgtg
atggaacatcctcaaactgttttactgactaaggttttacaaggcaacatatccttagga
gaggcccatataaataagttagatccctctaaggtgctaagccggtggatggatctgcag
caatctgttaacttgctattcgacagtaaaactgcttctggccagagagatgtggctgct
ggcatttgtcaattgctagagaagaaagaaggcatctttcgccagaaaatgatgggaaag
agggttaattttgcatgccgttctgtcatatcaccagatccttatttggcagtcaatgaa
attgggatacccccatattttgctataagattatcctatcctgagagagtgactccttgg
aatgccatgaagttaagaaatgctatccttaatggccctgactcccatcctggtgctaca
cactattctgataaacaagcaacagtcaagcttcaacgaagtccgaagttgcttgctatg
atatcaagaaagttaccttcatcaagaggagttattttggatcaagggaagatttctgat
caggaatttgaagggaaagttgtgtatcgccacttgaaggatggtgatgttgtgcttgtc
aatagacagccaacactccataaacctagtataatggctcatatagttcgtgttctgaag
ggggaaaaaactgtacggatgcactatgcaaattgcagtacttataatgctgattttgat
ggcgatgagattaatgtacattttccacaagatgaaatttctcgggctgaagcttacaat
attgtgaatgctaacaatcaatatgtgaaacctacaagtggggatccaatcagagcttta
attcaggatcatattgtgagtgcttctcttcttaccaaaaaggatactttcataacttat
gaagagttcaatcaattactctatagttctggtgtatctatggctggggtaggctccttc
tctggcaaacacgggcagaaagttttcatgacaaattctgagtgtgaaatgtttttgttt
cctccagcaatatggaagcctgaacccctatggacaggaaaacaggttatcagtgcattg
ctatactatatcaccagaggttcaccaccatttacggttgagaagaatgcaaaaatccca
tcaaattttttcaaaactcaggtcagggagggtgaaagatatacacgtgataagtcaaga
gacaaggatttgcctgatgaggataaattattgatatataaaaataatttggtgcgaggt
gtggttgataaggctcaatttggtgactatggtataatacatacagtgcaagaattttat
ggatcgaatgttgctggtaacctactctcagcattaagtcggttgtttacttccttttta
cagatgcatgggttcacatgtggagtagatgatcttatgataatagaagaaaaggatgtt
gaaagaatgaatcaactaagcagttgtgaggaaattggtgacattgttcatcgggaattc
attggagtaatgaatggtgataatatagatacaaccacaatgcagttgaatattgagaaa
aaggtacgcagtaatggagaagcagccttaacatacttggataggaaaatgataagcaat
cttaactcaagaacaagctcaggaatattaaaggagctactatctgaaggaatattgaaa
ccttcaggaaaaaattgtatttctcttatgactacatctggagctaagggtagtatggtg
aatttccagcagatatcttctcatctaggtcagcaagagttggaaggaaaacgagtccca
cgcatggtttctggaaagaccttgccctgctttgctccctgggattgttcccctagagca
ggagggttcattattgaccggtttcttacaggccttcatccgcaggagtactactttcat
tgcatggctggtcgtgaggggttagttgataccgctgtcaaaacatctcgcagtgggtac
ctgcaaagatgcttgatgaaaaacctcgagtgccttaaagtttgttatgatcatactgtc
cgagatgctgatggttcgattattcagtttcactatggagaagatggtgttgacgtccat
cagactagctttatcaacaaatttgaagcgttgtcaactaataaagaattggtttatagc
aactgttgccgtcagctagacagatcaagtccatatattaacaaattgcccgatgctctg
aaaggaaaagcagagaatttctttcgtgactccttaaaacagagaaatcttggtttgaaa
cgacgagatctcttaaagttgatggagcataagtatgtctcttgtcttgctcaaccaggt
gaatcggttggtgtattagcttctcagtctgttggcgaacctgcaacacagatgactttg
aatactttccaccttgctggtcgaggtgaaatgaacgtgacacttggaattccacgtttg
caagaaattgtcatggctgcttcacgtgatatcaaaactccgtttatgacatgccccttg
agaccgaataaatctatggaagatgctatttgtcttgccgacaaattgaagaaaatcact
gtagctgacataattaagagtatgaaggtttctgttgtacaagtaacagttcatgccggt
caggtttgcagtatatataaacttgtgatgaagctatataaacctaaacagtatccaaaa
tacactgatattacccttgaagattgggaggacactttgagagttttctttgtgagagag
ttagaggatgctattgaaagtcacatggcactgctttctaaaattagtggcataaaaaaa
ttcaagacagatccacaatcaaattattcaaacagctcagaagatggtcatggcaatgaa
tcagaatcagagacaaaaggtaaaaataaggatgatgatgatgatgatggtgttgttgaa
gacactgaggggtatgaagatcttggatcagatgcgcaaaagagaaaacggcaaggtact
gatgaggttgattatgaggatggtccggaagaggaaatgcatgatggtgagcagtcagag
gaaactgaaaatgacgaggatggcagtgatgtggacgttaatgagaatgataatgacatg
acacttgatgctaataattctcaaggacttgaaaaatcatccaagttcaagcccattgtt
gaaaaaaatagtttgaaacgggaaaagaaaaaatctaaagcaataacaaaaaaatatgac
agggcagtttttgtgaaagctaaagggatgcatttcgagatccactttaaatttaccggt
gaacctcatattttgttagcgcagattgctcagagaacagccaagaaggtttgcattcaa
aattttggaagggttggtgaatgtaaagctattacatgtaaagaaagtggagtaatatac
tatggtgaagatggcaggaatagggatgatattccagcctcgatgaaagaaaaaatacca
gcattgcagacatcagggatacattttaaaacattctgggagttgcaagatgatcttgat
gttaggtatatttattcaaacagcgttcatgctatgctaagtgcttatggggtggaagca
gccagggagaccatcattagggaagtacaaaatgttttcaaatcttatgggatatcagta
aatatccggcacttgacactcattgctgactttatgacgcactctggtggctatagtcct
atgaacagaacggggagcatagcagactgcacatcccctttcatcaaaatgtgctttgag
acagcttccaaatttattgttgaggcagcttatcatgggcaggtggacaacttggagaca
ccatcttcccgaatttgtcttggtttgcctgtgaaggtgggaactgggtgccatgatttg
atacagaagcttgagatatga
DBGET
integrated database retrieval system
