Vigna umbellata (ricebean): 124830681
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Entry
124830681 CDS
T09662
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03030
DNA replication
vum03420
Nucleotide excision repair
vum03430
Mismatch repair
vum03440
Homologous recombination
vum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124830681
03420 Nucleotide excision repair
124830681
03430 Mismatch repair
124830681
03440 Homologous recombination
124830681
03460 Fanconi anemia pathway
124830681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124830681
03032 DNA replication proteins [BR:
vum03032
]
124830681
03400 DNA repair and recombination proteins [BR:
vum03400
]
124830681
Transcription factors [BR:
vum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124830681
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124830681
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124830681
MMR (mismatch excision repair)
124830681
DSBR (double strand breaks repair)
HR (homologous recombination)
124830681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
124830681
NCBI-ProteinID:
XP_047160417
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAAKSITPDGVSTLLANPSPDSLSDLPDIVVQIVDLKPSGNRYMFSASDGKKKLRAILPS
NMYSEVLSGNIQNLGLVRILDYTLNDIPNKSEKYLIVTKCEPVSPALENEIKCEEPGILL
KPKEEVGSKTEGGAGVVLKQKQEVVTKSAAQILNDQHRNSAPAARLAITRRVRPLVSLNP
YQGNWTIKVSVSNKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFYDKFVL
GKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEVAGEASFVPETKFSFVQIDQLGP
YVNKSELVDVIGVVKNVSSTMSIRRKSDNESIPKRDITIADETKKTVVVSLWNDLATNTG
QDLLDIADQSPVVAIKSLRVGDFEGVSLSTISRSVILVNPDVPEAKKLRSWYESEGKDAS
MDSVGSGSSPTSNNGIRSVYTDRVPLAHITSDQSLGETKPAFFSVRGYISFIKPDQAMWY
RACKTCNKKVTENIGSGYWCEGCQKSDEQCSLRYIMVAKVCDTSGEAFFSVFNQEAEKIV
GCSADALDDLKSQEGEDNPYNLKLKQGTWVPHLFRVSVTQNEYNNEKRQRITVRAVVPVD
FAAESRMMLEEISKMRA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaaatcgatcacacccgacggcgtttcgacgctcctcgccaacccttcccca
gattctctgtcggatcttcccgacattgttgttcaaatagttgatctcaagcccagcggc
aacagatacatgttctcggccagtgatgggaaaaagaaactgagggcaattcttccttcg
aatatgtattccgaggttctctctgggaacattcaaaacctaggtcttgttcgaattctt
gattacactctcaatgacatccctaacaaatctgaaaagtaccttattgtcacgaaatgt
gagccggtatctcccgctcttgaaaatgagatcaagtgcgaggagcctggtattcttttg
aaacccaaagaagaggttggatcgaagactgaaggtggtgctggtgttgttttgaagcaa
aagcaggaagtggttacaaaatctgctgcgcagattctaaatgatcaacatagaaattcg
gctcctgctgcacgcttggcaattacgcgtagggtgcgtccactcgtttcgttgaatcct
tatcagggtaattggacgataaaagttagcgttagtaacaaaggaaacatgcgtacctat
aagaacgctaggggtgaaggttgtgtattcaatgttgaattgacggacgaagaaggtact
cagatccaggcaaccatgtttaacgatgccgccagaaaattttacgacaaatttgttctg
ggaaaggtttattatatttcgaaggggacactaaaagttgccaacaaacagttcaaaact
gttcaaaatgattatgaaatgacgctcaacgagaattctgaggtggaagaggtggcgggt
gaagcaagttttgtcccggaaacaaaatttagctttgtccagattgatcagctaggtcct
tatgtcaacaagtctgaacttgtggatgtcattggagttgttaagaatgtttcttcaaca
atgagcattcgtaggaagagtgacaatgagagcattccaaagcgcgacattactatcgct
gatgaaacgaagaagacggtagttgtgtcgttgtggaatgatcttgctactaacacagga
caagatttactggacattgctgatcaatctccagttgttgcaatcaagtctctaagggtt
ggggacttcgaaggtgtttctttgtcaactataagcagaagtgtaattctggtaaatcca
gacgtacccgaagcaaagaaactcagaagctggtatgaatctgaaggcaaagatgcttca
atggactctgtaggttctggttcaagtccaacatctaataatggaattagatcagtgtac
actgatcgtgttccacttgctcacataacctccgaccaatcattgggagagacgaagcct
gcgtttttcagcgttagaggatatataagcttcataaagcctgaccaagcaatgtggtat
cgtgcctgtaagacatgcaataagaaagttactgaaaacattggttctggatattggtgc
gaaggatgccagaaaagcgatgaacaatgcagtttaaggtatattatggttgccaaggtt
tgcgatacaagtggtgaggctttcttctccgtctttaatcaggaagctgagaagattgtt
ggatgctctgcagatgctttagatgaccttaaatcacaagaaggagaagataatccttat
aatctgaaattgaagcaaggaacttgggttccgcatcttttccgcgtcagtgttacccag
aacgagtataataacgagaagcggcaaaggataacggttcgagcagttgttcctgttgac
ttcgcagctgaatcaaggatgatgctggaagaaatatcaaagatgagagcataa
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