Vigna umbellata (ricebean): 124831128
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Entry
124831128 CDS
T09662
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124831128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124831128
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124831128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_ACSF4
DSE1_N
Tricorn_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
124831128
NCBI-ProteinID:
XP_047160986
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSLISQHVRTKNEVIKSKREVEDDVKNNDTLKVRKRKKEFEGEEVKEMKKLESFLFGSLY
SPVEFGKEDEEVEPGKAAEKVSGLFFTDRSADTVLSVYQKEDADLSEGDRGHDDERALQR
KPVWVDDEEENATVNIAKVFRLRKLRKEEGEDLISGSEYVSRLRAQHVKLNPGTEWARVD
SKTDRGSDDESTDDENEAIVSRGFEDLDGVLKTNEDLVVKSGAKLLSGHLEYSRLVDANI
QDPSNGPINSVQFHQNGQLFLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPD
GSQVIVSGRRNFFYSFDLVKARVDKIGPLVGREEKSIEDFEVSPDSQLIAFIGNEGYILL
VSTKTKQLVGTLKMNGTVRSLAFAENGQQLLSCGGDGHVYHWDLRTRTCMHKGVDEGCIN
GTALCTSPSGTHFATGSDSGIVNIYNREEFLGGKKKPIKAIENLTTRVDFMRFNHDSQIL
AICSGMKKSSLKLIHIPSYTVFSNWPPPNRSLYYPRCIDFSPGGGFMAVGNASGKVLLYK
LHHYQHA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatatcccaacatgttcgcactaaaaacgaggttattaagagcaagagggag
gttgaagatgatgtcaagaataatgatactctgaaagtgaggaagaggaagaaagaattc
gagggagaagaagtgaaagaaatgaagaaacttgagagttttttgtttggttctctctat
tcccctgttgagtttggaaaggaagacgaagaagtggagcccgggaaggctgctgaaaag
gtttcgggtttgttcttcactgaccggtctgcggatactgttctctcagtttaccaaaaa
gaagatgctgacttgtccgagggagatcgtggacatgatgatgaacgtgctttacaaagg
aaacctgtgtgggtggatgacgaagaagaaaatgccactgtgaacatagccaaggttttc
agattgaggaagttgaggaaggaagagggcgaggatttgatctcgggttcagagtatgtg
tcaagattgagggctcagcatgttaagctcaacccaggaacagaatgggcacgggttgat
tctaaaacggatagaggttccgatgatgagtcgactgatgatgaaaacgaagctatcgtg
agccgaggttttgaggatttggatggcgttctcaagacaaatgaagacctggttgtgaag
agtggtgcaaaattgttgtccggacatcttgaatactccagacttgtggatgcaaatata
caggatccttctaatgggcccataaattcagttcaattccatcagaatgggcagcttttt
ctcgccgctggattggatcggaagcttagattctttcaaattgatggcaagcggaatact
aaaattcagagcatcttccttgaagattgccccattcgaaaagcgtctttcttgcctgat
gggtctcaggttattgtatccggaagaagaaattttttttatagttttgatttagttaaa
gctagagttgataaaataggtcctctggttggtagggaggagaagagtatagaggatttt
gaagtatctcctgattctcaattgatagcatttataggtaatgaaggttatatattattg
gtttcaacgaaaacaaagcaattagttggtacactaaagatgaatggaacagtccgttca
ttagcttttgctgagaatggacagcagttgttaagctgtggcggtgatggccatgtttac
cactgggatctgagaacgagaacttgcatgcataaaggtgtagatgaaggttgcataaac
ggcacagcactatgtacttccccaagtgggactcattttgcaaccggttcagacagtgga
attgtgaatatttacaacagagaggaatttcttgggggcaagaaaaagcctatcaaggcc
atagagaatttgactacgagagtggattttatgagatttaatcatgactctcaaatatta
gcaatctgttctggcatgaagaagagcagcttaaaattaatacatatcccatcctatact
gtgttttccaactggccacctcctaataggagcctgtattatcctcgctgtattgatttt
agtccaggtggtggtttcatggctgtgggaaacgcttcaggcaaagttttattgtataag
ttgcaccattaccagcatgcctaa
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