Vigna umbellata (ricebean): 124831265
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Entry
124831265 CDS
T09662
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124831265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124831265
03036 Chromosome and associated proteins [BR:
vum03036
]
124831265
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124831265
Coactivators
SAGA/TFTC/STAGA complex
124831265
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124831265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
124831265
NCBI-ProteinID:
XP_047161151
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSASQFPGSDAVLSQGSNNTSSQ
SSSQWPTSNHDSQSDGQNQEPKTAQEQHPSEMEPKQHGSLGEHLQHVASQDVNNIHLSQK
QSQDDSHQAPAVQVPLHNSQTIGIHNSGKDSVLNKEVVKSHNPSSESQYAKLQQMSNQQA
TVSEQPSSQVNRSNKQVPFGLLLPILLPQLAKDRAMQLQTLFTKLKKDEIQKDSFVRLMK
GIVGDQMLRLALAKVQMQPQARPNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRSM
NVAVDQSRMSSSAGQTMDSNARKSQEFDVKIESQGLQPNQLTSSTSNSAAQETERASVHI
QGLNKQQQHHLHFASAYGNSGGNYNPYSGTTSTSTSSIKPQSHDSHMSQIPHQSIGSNHL
SGSTHGLGVIGMPKLEQQNSFNDPKRLPGGSVSSAVNNAASQQTSNAWQPSTNKEQNLGL
MSSVSYVKKEPGDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGLKDEFSRGLPASTS
MPPTTSTGLLPHSSASASAVTHLDSSVLLSSQIPSNASGIAARPSLKKSAATQKKPLEAL
GSSPPPSSKKQKTSGGYAEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKA
VQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLSVEERMRGLISNLIRLSKQ
RVDFEKTRHRTVVTSDVRQQIMTINRKVREEWDKKQAEAEKLRKLNDVDSNTGGDGDKDK
DDGRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVSSG
SQPAKDVNRKSSSTSERNTKDNQEGEKRGSTPFLASSVARKLGKSHAMAPQTRVARSISV
KDVIAVLEREPQMSKSPLIHRLYEKIHSETPVEQG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggacccatctatcatgaagcttctagaagatgacgaggatgaaacaatgcattcaggg
gtggatgtggaagccttccaggctgctctaaatagagatataggaggagatgtgtctgct
tctcagtttcctggttcagatgcagtgttgtctcaaggaagcaataatacatcaagtcaa
tcttcatcacagtggcctacttctaaccatgacagccaaagtgatggtcaaaatcaagag
cctaaaactgcacaagagcaacatccatctgagatggagccaaagcaacatgggtctctt
ggcgaacaccttcagcatgttgcttctcaggatgtaaataatattcatttatcacagaaa
caatctcaagatgacagtcaccaagcacctgctgtacaagttcccctccacaattctcaa
actattggaattcataattctggaaaggattcagtgcttaataaagaagtagtaaagagt
cataatcccagcagtgaatctcagtatgcaaagttgcagcagatgagtaatcaacaggct
acagtctctgagcagccaagtagccaagtaaatcgtagtaataaacaagtaccatttggc
ctgttgctacccatcttgcttcctcaacttgccaaagacagagccatgcaacttcaaacc
ttgtttactaaattgaagaaagacgaaatacagaaagacagttttgtgcggcttatgaaa
ggtatcgtgggggaccagatgcttagattagcattagcaaaggtgcaaatgcaacctcag
gcaaggcccaatcaagcatctgccgggcagcagcttcctgtaaggatgccaactgttagt
tcaggtgctagacaattgaacgatccccatgctttagcacagatgcatcaaagaagtatg
aatgttgccgttgaccaatctcgcatgagttcttcagctggccaaaccatggatagcaat
gctagaaaatctcaggaatttgatgttaaaatagaatctcaaggattgcaaccaaaccag
ttgacgtcttccacttccaactctgcagctcaagaaacagaaagagcatcagttcacata
caagggctcaataagcagcagcaacatcatctacattttgcatcagcatatggaaacagt
ggtggtaactataacccttattctgggacaacaagcacttccacttcgtctatcaaaccg
caatcacatgattcacacatgagtcaaattcctcatcaaagtattggttcaaatcactta
agtgggtcaacacatggtttgggtgtaattggtatgccaaaacttgaacagcagaattct
ttcaatgatcccaagagactgccaggtggatctgtgtcctctgctgtaaacaatgcagca
tctcaacaaacttcaaatgcttggcaaccatcaacaaacaaagaacaaaatttgggctta
atgtcatctgtttcttatgtcaagaaggaacctggtgacttgtctactgagcagcaaaat
aggcataatttgtctaaattgcatgggtattcttctgttaattctgctcagcttgaacag
agtggtgccagtcaaggtctaaaagacgagttttcaagaggtcttccagcatctacaagc
atgccacctacaacatctactggcttgctaccacacagttctgcttctgcttctgccgtg
acccacctagattccagtgtcttgctaagctctcagattccatcaaatgcttctggaatt
gctgcaaggccatctcttaaaaagtctgctgctacccaaaagaaaccacttgaagcactt
ggttcctcacctcctccttctagtaaaaaacaaaaaacttctgggggatatgctgaacaa
agcattgaacaacttaatgacgtcactgctgttagtggagttgacctcagggaagaggaa
gagcagttattttcagggcccaaagaggatagtcgagtgtcagaagcatctcgaaaggct
gtgcaagaagaagaggagaggctgatcttgcagaaagctccattgcaaaaaaaattaatt
gacatcatggccaagtgtggcttgaagggtatgagcaatgatgtggagaaatgcttgtca
ctgagtgtggaggaaaggatgcgcggactgataagtaacctgattagattatcaaaacag
agggttgattttgagaaaacgagacatcggactgttgtcacttcagatgttcggcagcaa
atcatgacaataaataggaaagtaagggaagagtgggataaaaaacaggcggaagcagag
aagcttcggaaactaaatgatgttgacagcaatactggaggtgatggtgacaaggataag
gacgacggccgtgctaaatcaacaaaggtgaacaaggaagaggatgacaagatgaggaca
aatgctgcaaatgttgctgctcgtgctgcttatgggggagatgacatgctgtcgaagtgg
caacttatggctgagcaagccaagcagaaacgtgaagggggagtagacgtgtcatctggg
tctcaaccagctaaagatgtgaaccgcaaatcttcatcaacatctgaaagaaatacaaag
gataaccaagaaggggagaaaagaggttcaaccccttttctagcaagttcagtggccaga
aaactcgggaagagtcatgccatggcccctcaaactagggtagctcgaagcatctctgtc
aaggatgtgattgcagtcctggagagggagccccaaatgtctaaatccccactcatacat
cgcttgtacgagaaaattcattctgaaaccccagttgaacaaggttaa
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