Vigna umbellata (ricebean): 124831489
Help
Entry
124831489 CDS
T09662
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL
KO
K12133
MYB-related transcription factor LHY
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124831489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124831489
Transcription factors [BR:
vum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
124831489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124831489
NCBI-ProteinID:
XP_047161441
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTRIGTATLHSGAK
DGKINLVEFSHDNQALDLEKEPVPEIYDLDEGLTTVKENKDENCSKVFTVIQEVPCSSLS
SANRSSISMSVPLGNSSVFKETTTSVKEVITPDDKTESFLTVELENGNLEINGGKQANGT
SKNSTIENSDALQMKLVQNEKTDGLDSALTIEGMQGNNQNYPRHVTVHVVDGNLGTCTQN
PSQDMLFRDCMFQPIGGANGQPNLFTNSAPSNTRESQNNTAQSSAHQSFLPYPPFTQHNQ
DDYQSFLHMSSTFSNLIVSTLLQNPAAHAAASFAATFWPYANPETSADSPRCSQGGFTSR
HIGSPPSVAAIAAATVAAATAWWATHGLLPLCAPLHTVFACPPASVTAVPSMNTSETPSL
KAEQEKSTLQNPPLHDQMMHPEYSEAPQAQHSASKSLAVISSDSESGDVKLNTSPKATDH
ETNEMISEHLDSNKTKGRKQVDRSSCGSNTASSSDVETDALGKDEKGKEEPETPDANHLA
IEFSNRRRSICNLTDSWKEVSEEGKLAFQALFSREVLPQSFSPPHALTNKDQMGITNDNQ
QTIDDRNEDLESKKCSSNYKPMQKNSPFVENNVGLLTLGLGQGKLKTRRTGFKPYKRCSM
EAKENRVGASNQGEEKCCKRIRLEGDTST
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtactcctctggagaagaagtagttgtaaagactagaaaaccgtatacaatc
acaaagcaaagggaacgatggacagaggaggagcataataggtttctagaagctttgaag
ctgcacgggcgagcatggcagcgcatagaagagcatataggaacaaagactgccgtgcaa
atcaggagccacgcacagaagtttttcacaaagttggagaaagaagcccttgtaaagggt
gttccaattggacaagctcttgatatagatattccccctccacggcccaaaagaaaacca
agcaatccttatcctcggaagaccaggattggtaccgcaacattacatagtggagcaaag
gatggaaagatcaatttagtcgaattttcacatgacaaccaagcactggacttggaaaaa
gaaccagttccggagatttatgatttagacgaggggctaacaacagtaaaggaaaataag
gatgagaactgttcaaaagtatttacagttatccaggaggtgccatgttcctctctatct
tcagcaaacaggagttcaatatctatgtcagtgccgctgggaaattcatccgtattcaag
gagactacaacttcagtgaaagaggtaataactccagatgacaaaactgaatcatttctg
actgttgaacttgaaaatgggaatttggagatcaatggtggaaaacaggcaaatggaact
agtaaaaactccacgatagagaattctgatgctttacaaatgaaattggttcaaaatgag
aaaacagatggtctcgatagtgcattaacaatagaaggaatgcaaggcaataatcagaat
taccctagacatgtaactgtgcacgttgttgacgggaaccttggaacatgtactcaaaat
ccatcacaagatatgctgtttcgtgactgcatgtttcagccaataggaggggctaatggg
caaccaaatcttttcaccaattcagctccatcgaacacaagagaaagtcaaaataacaca
gcacaatcttctgctcatcaatcatttcttccgtatcctcccttcacccaacacaaccag
gacgattaccaatcatttcttcacatgtcttccacattttctaatcttattgtctctacc
ttgctgcaaaacccagcagcccatgctgcagcaagtttcgctgctacattttggccctat
gcaaatccagagacttcagcagattctcctaggtgctctcaaggaggtttcacatctaga
catattggttcccctccaagcgttgcagctattgcagctgctactgtagctgctgcaact
gcgtggtgggcaactcatggactgcttcctttgtgtgctcctcttcatactgtttttgct
tgtcctcctgcatctgtgactgcagtcccatcaatgaatacttctgaaacaccatctcta
aaggcagaacaagaaaagagtactctacaaaatcctcctctgcatgatcagatgatgcat
ccagaatactcggaagctcctcaagctcaacattcagcttcaaaatcactagctgtcatt
tcatcagattctgagagtggagatgtcaagttaaatacttcaccaaaggctaccgatcat
gagacgaacgaaatgatttctgagcaccttgattccaacaaaacgaaaggcagaaaacag
gttgaccgttcctcgtgtggttccaacacagcctcaagcagcgatgtggaaactgatgca
ctagggaaggatgagaaagggaaggaagagcctgaaactcccgatgctaaccatttagcc
attgagtttagtaatcgtcgtagaagcatttgcaaccttaccgattcttggaaagaggtc
tctgaagaggggaaactagcctttcaggctttgttctccagagaggtgttacctcaaagc
ttttcacctcctcatgctttaacgaataaggaccaaatgggcatcaccaatgataaccag
caaaccatagatgacagaaatgaagaccttgaaagcaagaaatgcagttctaactataaa
ccaatgcagaaaaattcgccatttgtagaaaataatgtgggactgttaaccttagggctt
ggacaaggaaagcttaagactcgtcgaacaggctttaaaccctacaaaagatgttccatg
gaggccaaggaaaatagggttggagcgagcaatcaaggtgaagagaaatgttgtaagaga
atacgtttggaaggggatacttcgacttga
DBGET
integrated database retrieval system