Vigna umbellata (ricebean): 124831513
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Entry
124831513 CDS
T09662
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Module
vum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124831513
Enzymes [BR:
vum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124831513
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
SH
Motif
Other DBs
NCBI-GeneID:
124831513
NCBI-ProteinID:
XP_047161480
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All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MFPQTPTISLFIVLSSLILCNGYYIEELLYKTNYKHYPMHHGRFIKRKHEHFGLITRANR
VAPRGTVNVDDFGAKADGRDNSEAFGKAWSEACSRGSILVVPGNRIYRLKPITFSGPCRP
NTAFMLYGTIEAWTQMSAYKDRQHWIMFDSVSNFRVGGGGTFDGKGKKWWQNSCKATTNL
PCNDQPRPKAVTFFQCKNLEVRNLMFKDAQQMHLVFDGCFNVIASNLVISAPGDSPNTDG
IHVAETQNIVISNSHIGTGDDCISIISGSENVRATDITCGPGHGISIGSLGADKSEAEVS
NVVVNRATLTGTTNGVRIKTWQGGSGYARNIKFLNIMMQNVTNPIIIDQYYCDQTKPCQE
QNSAVQLSNVLYQNIRGTSASEVAIKFDCSRAVPCRQIYLQDVILEPQGRGGTIATCENV
RYVNRGKFFPQCTP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacaaacaccaactatttcacttttcattgtcctctcttcattaatcttatgt
aatggctattacatagaggagctactttacaaaacaaactacaaacactaccctatgcat
catggcagattcatcaagagaaaacatgaacattttggtcttataacaagggctaataga
gttgcccctcgtggaacagttaatgttgatgatttcggagccaaggcagatggaagagat
aattccgaggcatttggaaaggcatggagtgaagcatgttcaagagggtctatccttgtg
gtacctggaaataggatctatcgtcttaagccaatcacattttctggtccatgtcgaccc
aacactgcctttatgctctatggcacaatcgaggcatggactcagatgtcggcatacaaa
gatagacaacattggattatgtttgacagtgtttcaaatttcagagttggtggtggtggc
acattcgatggcaaaggaaaaaaatggtggcaaaactcctgcaaagcaaccactaacctt
ccatgcaacgaccaaccaagaccaaaggctgtgactttctttcaatgcaaaaatttggaa
gtgagaaacctgatgttcaaagatgctcagcaaatgcacttagtctttgatggatgcttc
aatgttattgcttcgaatctggtgatcagtgcaccaggggacagccccaacactgatgga
attcatgttgcagagacacaaaatatagtgataagcaatagtcatattgggacaggtgat
gattgtatttcgataataagtgggtcagaaaacgttcgagcaacagatatcacctgcggc
cctggacatggaataagcattggtagcttgggagctgataaatcagaagctgaagtgtcc
aatgtggttgtgaacagagcaactttaaccggaaccactaatggagtgagaataaagact
tggcagggaggctctggttatgcaagaaacatcaaatttttgaacataatgatgcaaaat
gtgacaaatcccatcatcatagatcaatactactgtgaccaaaccaagccatgtcaagag
cagaactcagctgtgcaattaagcaatgttttataccaaaacataagaggaacaagtgcc
tcagaagtggctatcaaatttgactgcagcagagcagtcccatgcaggcaaatctatctg
caggatgtgattttagagccacaaggcagaggtggcaccattgcaacatgtgaaaatgtt
agatatgtgaacagaggaaagttttttcctcaatgcactccatga
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