Vigna umbellata (ricebean): 124831554
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Entry
124831554 CDS
T09662
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124831554
03036 Chromosome and associated proteins [BR:
vum03036
]
124831554
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124831554
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124831554
SLIK complex
124831554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
124831554
NCBI-ProteinID:
XP_047161532
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MLSDEYYEQDGEEQSDSLHYRGMKKPSESNSWPQRMSTTANRTLHRNSRFSDDAEEDDYD
DGDNDNDGDDADYEEEDEADEDDPDDADFEPATIGHAGNKDKDWEGEGSDEDDDSDENIV
VSDDDESFYAKRPKGRQRGKIGQSIKSTRDRKAYAPSGRQRRLKSSFEDNESTTEDSDND
SDEDFKSSKKRGVHARKNNGRSSSVTGLSMRNSEVRTSSRTVRKVSYMESEESEEVDEGK
KKKSQKEEIDEEDSDSIEKVLWHQPKGTAEDAERNNRSTEPVLMSHLFDSEIDWNEMEFL
IKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDMRYRRSISREEIEVNDVSKEMD
LDIIKQNSQVERIIADRISKDNSGDVIPEYLVKWHGLSYAEATWEKDTDIAFAQNAIDEY
KAREAAMAAVQGKMVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDT
NVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIII
YVGTRASREVCQLYEFYNEKRPGKPIKFNALLTTYEVVLKDKAVLSKIKWSYLMVDEAHR
LKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNL
SSFNENELANLHTELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFH
NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLV
ILDKLLVRLHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFN
APGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYR
FVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGA
EELFKEERNDEESKKRLLSMDIDEILERAEKVEEKEADGEQGNELLSAFKVANFCNDEDD
GSFWSRWIKPDSVFQAEEALAPRSARNIKSYAEVDPSEKTNKRKKKEPEPPERVQKRRKP
DYSAPAVPMIEGACVQVRSWSYGNLSKRDALRFSRSVMKYGNESQIDLIAAEVGGAVGAA
PTGAQVELFNAFIDGCTEAVELGNLDVKGPLLDFFGVPVKANDLLTRVQQLQLLAKRIDR
YDDPIAQFRVLSYLKPSNWSKGCGWNQIDDARLLLGIYFHGFGNWEKIRLDERLGLTKKI
APVELQHHETFLPRAPNLKDRANALLEQELAVLGVKNANSKVGRKPSKKERDNIISLVRG
QEKKKKSGSVNVQMRKERFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVE
EMKTLKRLHRLQQTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTVRLW
KYVSTFSHLSGERLHQIYSKLRQEQDEAGVGPSHGNGSVSASFTRNGNPFRRHMERQRGL
KNMSTYQTPEPVDNSGKSEAWKRRRRAESDNQFQGQPPPQRTVSNGLRITDPNSLGILGA
GPSDKRFANEKPYRTQPGGFASRQGFSSGIK
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggatgagtattatgagcaggatggggaagagcaaagtgattcactgcattac
cggggtatgaaaaagccatctgaatcaaattcatggccacaacggatgtcaaccactgca
aatagaactttgcataggaattcaaggttttcagacgatgctgaagaagatgactatgat
gatggagataatgataacgatggtgatgacgctgattatgaagaagaggatgaagcagat
gaagatgaccctgatgatgcagactttgagcctgccacaattggtcatgctggaaataag
gataaagattgggaaggtgaaggctcggatgaagatgatgacagtgatgaaaatatagtt
gtctcagatgacgatgagtctttctatgcaaaacggcctaaaggaaggcaacgaggtaag
attggacaaagcataaaatctaccagagatcgcaaagcgtatgctccatctggtcggcaa
agaagacttaaatcatcttttgaggacaatgagtcaacaactgaggattctgacaatgac
agtgatgaggatttcaaaagctcaaaaaagcggggtgttcatgctcgcaaaaataatggt
cgttcttcttcagtaacaggtctttctatgcgcaacagtgaggttcggacatctagtagg
actgttaggaaggtatcatatatggaaagtgaagaaagtgaagaagtcgatgaagggaaa
aagaaaaaatcccaaaaggaagaaattgatgaggaagatagtgactccattgaaaaggtg
ctttggcatcaaccaaagggcacagctgaagatgccgaaaggaataaccgatcaacagag
cctgttttaatgagtcacttgtttgattcggaaattgattggaatgagatggaatttttg
ataaaatggaaagggcaatcacatttgcactgtcaatggaaatcttttgcggagctgcaa
aacctcagtggttttaagaaggttttgaattatacaaagaaaataatggaagacatgagg
tataggaggtcaatctcaagagaggagattgaggtcaatgatgttagtaaggagatggat
ttagatattataaaacagaacagtcaggtggaaaggataattgcagatagaatcagcaaa
gataattctggcgatgttattccagaatacttggtcaagtggcacggactatcttatgct
gaagcgacttgggaaaaggacactgatattgcttttgcccaaaatgctattgacgagtat
aaggctcgtgaggctgctatggcagcagttcaaggaaagatggtggattctcagcgtaag
aaaagtaaagcaagtttgcggaagcttgaggaacaacctgagtggttgaagggtggaaag
ctccgtgattatcaacttgagggtctgaattttcttgttaacagttggagaaatgataca
aatgtcattttagctgatgaaatgggccttggaaaaactgttcagtcagtctcgatgctt
ggttttctacagaatgcccagcaaatccatggtccttttcttgtagttgtcccgctctcc
actctatcaaattgggccaaagaattcaggaagtggcttcctgatatgaatattatcata
tatgttggtactcgagctagtcgagaggtttgtcaactgtatgaattttataatgaaaaa
agaccagggaagccaataaaattcaatgcacttttgacgacatatgaagtagttttgaag
gataaggctgttctgtccaaaatcaaatggagttacctgatggtggatgaggctcatagg
ctaaaaaatagtgaggcacagttgtatacgacactttcagaatttagcaccaagaacaag
ttgcttatcactggtactcctctacagaacagtgtggaagaactatgggccttgcttcat
ttccttgatcctgataagttcaggagcaaagatgaatttgttcaaaactataagaatctg
agttcttttaatgaaaatgagcttgcaaatcttcacacagaactgaggcctcacatactt
cgaagagttatcaaagatgtggagaaatcattacctcccaaaattgagcgtatccttcgg
gttgaaatgtctcctcttcagaaacagtattataagtggattttggaacgtaattttcac
aatttgaacaaaggagttcgtgggaatcaggtttctcttctaaatattgtggtggaatta
aagaagtgctgcaaccatcccttcttgtttgaaagtgctgatcatggctatggtggggac
tcagggagtagtgataacagtaaactagagagaattgtttttagcagcggcaagcttgtc
atacttgataagctgcttgttagattgcatgaaaccaagcatcgggttttgattttctct
cagatggttaggatgttggatatactgggagaatatatgtcacttcgaggatttcaattt
cagaggcttgatggcagtacaaaagctgagctgcgacagcaggcaatggatcatttcaat
gcacctggtagtgatgatttttgctttcttctttcaacacgggcaggaggtttgggtatc
aaccttgccacagccgacactgttataatatttgattctgattggaatcctcaaaatgac
ctgcaggcaatgagtagagctcatagaattgggcaacaagaagttgttaacatatataga
tttgtgacaagtaaaagtgttgaggaagatattctggaacgtgctaagaagaaaatggtt
ctggatcacttggtgattcaaaaattgaatgcagagggtagattggagaagaaagaagcc
aaaaaaggaggcagttattttgacaaaaatgagctgtctgcaatcttacgatttggagct
gaggagctttttaaggaagaaagaaatgatgaagaaagcaagaaacgactcttaagtatg
gatatagatgaaattcttgaaagagcagagaaggttgaagagaaggaagctgatggggaa
cagggaaatgagttattaagtgcctttaaggttgccaatttttgcaatgatgaagatgat
gggagtttctggagccgatggatcaaacctgattctgtgttccaagcagaggaagctctt
gctcctcgttctgctagaaatataaaaagctatgcagaagttgatccatctgaaaaaact
aataaaagaaaaaagaaggaacctgaaccacctgaacgagttcagaaacgtcggaaacca
gattattctgctcctgcagtaccgatgattgaaggagcatgtgttcaagtgagaagttgg
tcatatggcaatttatctaaaagagacgctcttcgattttctcgttctgttatgaaatat
ggcaatgagagccaaattgacttaattgctgccgaggtgggtggtgctgttggtgcggct
ccaactggagcacaggttgaacttttcaatgcttttattgatggctgtacagaggcagtg
gaacttggaaatttagatgtgaaggggcctctgctggatttttttggtgtccctgtgaag
gcaaatgatctacttacccgtgtccaacaacttcaacttctggcaaagcgcattgatcga
tatgatgatcctattgcacaatttcgtgttctgtcatatctcaaaccatcaaactggtcc
aaaggttgtggatggaatcaaattgatgatgctagattgcttcttggaatatatttccat
ggttttggtaattgggaaaagataagattagatgaaagacttggcctcacgaaaaaaatt
gcaccagtagaacttcaacatcatgaaactttcttaccacgagctccaaatttaaaagac
cgtgctaatgcccttttggagcaagaacttgctgttcttggtgtgaaaaatgccaatagc
aaagtcggacggaagccttcaaagaaagagcgagataatatcatctcattggtacgtggg
caggagaaaaagaaaaaatcaggttctgttaatgtccaaatgagaaaggaaagatttcaa
aaaccccagaaggttgaatctatagtaaaggaagagggtgaaatgtctgacaacgaggaa
gtatatgaacagtttaaggaggtgaaatggatggaatggtgtcaagatgtaatggtcgaa
gaaatgaagactttgaaacgtcttcacaggttgcagcaaactagtgccaatcttcccaag
gagaaggtgctttcaaaaatacgcaactatttgcaacttctcgggcgaaggatagatcaa
attgtgttggaacatgaagaggagccctataagcaagatagaatgactgtgcgattgtgg
aaatacgtctccactttttcccatctttcaggggaaaggcttcatcaaatatattccaaa
cttagacaggagcaagatgaggcaggtgttggcccttctcacggcaatggatcggtatct
gcttcatttaccagaaatggaaacccattccgtcggcatatggagaggcaaagaggatta
aaaaatatgagtacctatcaaacgccagaaccagttgataatagtgggaaatctgaggca
tggaaacgaagaagaagagctgaaagtgataatcaattccagggtcagccgccacctcaa
aggaccgtaagtaatggactcaggattactgatcctaactcacttgggatccttggtgcc
ggtccctcggataaacgctttgctaatgagaaaccttacaggacacaacctggtgggttt
gcgtcaagacagggcttctcttcaggtataaagtaa
DBGET
integrated database retrieval system