Vigna umbellata (ricebean): 124832058
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Entry
124832058 CDS
T09662
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124832058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124832058
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124832058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
124832058
NCBI-ProteinID:
XP_047162129
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA
EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVASGRS
GFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGNSNRFGSPVGFESGN
GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGVNWGGSSAISA
QGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFAPTSSYSASNGGVDGAFADFYN
NSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKSSPGYVGGYTVNKRQPNRGIAT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagataatggcaagttatttatcggtggaatatcatgggacacaaatgaggag
cgactcagggagtatttcagtacttatggggaggttgtggaagcagtgataatgaaggat
cggacaacaggtagagccagaggatttggttttgttgttttttccgatcctgctgtcgct
gaaatagtcataaaagagaagcacaacattgacggaaggatggttgaggcaaagaaagct
gttcccagggatgatcagaacatactgagtagaaacagtggcagcatccatggttcacca
ggtcctggtcgcactagaaagatatttgttggaggtttagcatcaacagtgacggagagt
gatttcaaaaagtactttgatcagtttgggactataacagacgttgtagttatgtatgat
cacaacactcagaggccaagaggttttggatttatcacttatgattctgaggaggctgtt
gacaaagtcttactaaagacatttcatgaattgaatggtaaaatggttgaggtcaagcga
gcagttcctaaggaattatcaccaggaccaagccgcaccccactcggtggatataactat
ggtctcagtagggtcaatagtttcttaaatggcttcactcaggggtatagtccaagtact
gttggaggctatggacttcgagcggatggtagattcagtcctgttgccagtggtagaagt
ggatttgctccttttggatcaggttatggaatgagcatgaattttgagcctggtttgaat
gctggatttggggggaatgcaaatttcaatagcaatcttagctatgggcggggagtaaat
ccttattttattggcaactccaataggtttggcagtcctgttggatttgaaagtggtaat
ggaggaaacaattctttcttcagttctgtgactcgaaatttgtggggtaatggtggcctt
agttatggaacaaattctgcaaattccaatgcttatattggatcagggagtggaagtatt
ggtgggaatacatttggcaacactggagtcaactggggtggttcttcagcaatttctgcg
cagggaggagggaacaacatgtcacaaagtagtggcaacctgggttatggaagtggtgac
aataattatggcttggggactggagggtatggaagaaacactggtaccacttttgcacca
acatcttcgtactctgcatcaaatggtggtgttgatggggcttttgcagacttttacaat
aatagttctgtttatggggaccccacttggcgctcttcaaattctgagagagatggatct
ggtcccttcggttatggacttggtggagcagcttctgatgtttctaccaagagttctcca
ggttatgttggtggttatactgttaataagaggcagccaaataggggaatcgcgacatag
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