Vigna umbellata (ricebean): 124832161
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Entry
124832161 CDS
T09662
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124832161
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124832161
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
124832161
NCBI-ProteinID:
XP_047162252
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAALSCFILLFALSLLTPSFVSSSAVPDPELVVQEVQRSINASRRNLGYLSCGTGNPIDD
CWRCNPNWENNRQRLADCAIGFGKDAIGGRNGRIYEVTDSGNDDAVNPKPGTLRYAAIQD
EPLWIIFKRDMVITLKQELLVNSFKTIDGRGASVHIAGGGCITIHYVSNVIVHGIHIHDC
KPTGNTNIRDSPEHSGFWTKSDGDGISIFNSKHIWIDHNSLSNCQDGLIDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFLAPDIRFSKEVTKHEDAPQSEWMSWNWRSEGDMFLNGAY
FRQSGAGASSIYARASSLSARPSSLVGSMTVTAGALTCRKGNRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctttcatgtttcattcttctttttgctctttctcttctcacaccctctttt
gtttcttcctctgcagttccagaccctgaattggttgttcaagaggtacaaagaagcatc
aatgcctcaaggagaaacttgggttatttatcatgcggaaccgggaatcccatcgacgac
tgctggcggtgcaacccaaactgggagaacaaccgccagagactagcggactgcgccatc
gggttcggcaaggacgccatcggcggaagaaacggccgaatatacgaggtcacagactcc
ggcaacgacgacgccgtgaacccaaagccgggaaccctccgttacgccgccatacaagac
gaacccctgtggataatcttcaagagggacatggtcatcacgctaaagcaagagcttctg
gtgaactctttcaagacaatcgacggcagaggcgcgagcgtgcacatcgccggcgggggc
tgcatcaccatacactacgtaagcaacgtgatcgttcatgggattcacattcacgattgc
aagcccaccgggaacaccaacatcagagactcgccggagcactccgggttttggacgaaa
tcggacggcgacggaatctccatctttaactcgaagcatatttggatcgatcataactcg
ctgtcgaattgtcaggatgggctgatcgatgccattcatggatccaccgccatcaccatc
tccaacaattacatgacccaccatgacaaggttatgcttttgggacacagtgattcctac
acgcaggacaagaacatgcaggtcaccatagccttcaatcattttggagaaggtcttgtc
caaagaatgccaagatgcagacacgggtattttcatgtggtgaacaacgactacacacac
tgggaaatgtatgccattggagggagtgcgaacccgaccatcaacagccaaggaaacagg
tttcttgctccagacattaggttcagcaaagaggtaacaaagcatgaggatgctccacag
agtgagtggatgagctggaattggagatcagagggtgacatgttcttgaatggagcatac
ttcaggcaatctggtgctggtgcttcttccatctatgctagagcttcaagtctcagtgca
agaccttcttctcttgttggatccatgaccgtcactgctggtgcacttacctgcagaaag
ggaaaccgttgctga
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