Vigna umbellata (ricebean): 124832165
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Entry
124832165 CDS
T09662
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124832165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124832165
03036 Chromosome and associated proteins [BR:
vum03036
]
124832165
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124832165
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124832165
PBAF complex
124832165
GBAF(ncBAF) complex
124832165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124832165
NCBI-ProteinID:
XP_047162254
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MPPSPSFPSENRNKWRRKRKRESHKRHSKRHDEDDEDNDSDDDDNDSDDQFRSPNATPNT
DSRVEIEVVSPDGVQISRFPPAIKRTVTRPHAAVTAIAALEFGRGHSQHGVPVLENVSHG
QLQASSNVSAECLGGSSFVAAPPPVMKGSGVVKRFGTRVLVVPMHSDWFSPASVHRLERQ
AVPHFFSGKSPDHTPEKYMECRNYIVARYMEDPGKRITVPSCQVLSIGVGTEDLTRIVRF
LDQWGIINYCAQEPRHEYLDNDSCLMEDTSGALCVPSVTLRSIDSLIEFDKPKCKFKADE
IYSCRTMHNTDISDLDDTIREYLSENYCHYCSRSLPVVYYQSQKEVDILLCTDCFHDGRF
VAGHSSIDFITVDSSTDYGDLDGDSWTDQETLLLLEAVEIYNENWNEIAEHVGTKSKAQC
ILHFLRLPVEDGKLENINVSSISLSSNMNNQEGNGRLHCCSNGDSAGPIQNNQDSDNRLP
FANSGNPVMALVSFLASAVGPRVAATCAHAALAALSENNSGSASDIEALENDNRANSESI
NNRAGGHHGVVANSSQKNEDKLKVPGSCAQDDAGSTLLSAEKVKDAAKAGLSAAAMKAKL
FADHEEREIQRLCANIVNTKLKRLELKLKQFAEIETQLMKECEQVENLRLRFASERSHVV
SARLGNGGTTPPMNVSGVGPSMINNNNNSRQQMISASSSQPSISGYGNSQPVHPHMSFVP
RPSMFGLGQRLPLSMIQQSQAVSSNSMFNGPSNVQPAPNHSLSRPVSRTNSGLG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgccaccttccccttccttcccttcagagaaccgaaacaaatggcggaggaagaggaag
cgagaatcccacaaacgccactccaagcgtcatgacgaagatgacgaagacaacgattcc
gatgacgacgacaacgactccgacgaccagttccgcagccctaatgccacgcccaacacc
gactcgcgtgtcgagatcgaggtcgtctcgcccgatggagttcagatttcgcgcttcccg
ccggctatcaaacgcactgttacccgtcctcatgcagcggtcactgcgattgcggctctg
gagtttggcagggggcactcgcagcatggcgttccggttctcgagaatgtgtctcacggc
cagcttcaggcgtcctcgaatgtgtctgcggaatgtctcgggggctcgagctttgtcgct
gctcctcctccagttatgaaaggctccggcgttgttaagcgttttggcactagggttcta
gtggttcctatgcattcagattggttttctccagcctcagtgcatcgacttgagagacaa
gcagtgccacatttcttttctggaaagtcaccggatcatacgccggagaagtacatggaa
tgtaggaattacattgttgcaagatacatggaggacccaggaaagaggattacagtccct
agttgccaggttttgtctattggtgttggtaccgaagatttaactagaattgtaaggttc
cttgatcaatggggaattattaattactgtgctcaggaaccaaggcatgagtatttggac
aatgattcttgcctgatggaggacactagtggtgcactatgtgtgccatcagtgacatta
agatccatagatagtttgattgagtttgacaagcccaagtgtaaattcaaagcagatgaa
atttattcatgtcgaacaatgcacaatacagatatttctgatttggatgacacaataaga
gagtatctatctgaaaactattgccactattgttctcgttctcttcctgttgtatactac
caatcacagaaagaggttgatattttactctgcactgattgctttcacgatgggagattt
gttgccggtcattctagtatagatttcattacagtggattcaagtacagattatggtgat
ctagatggggatagttggactgatcaagagactttattgctgcttgaagcagtggagatt
tacaatgagaattggaatgaaattgctgagcatgttggtaccaagtcaaaagcgcaatgc
attcttcattttctccgtctacctgtagaagatggaaaattagaaaacatcaatgtatca
agtatttccttgtcatccaatatgaataatcaagagggtaatggaagattgcattgttgc
tcaaatggggattcagcaggacccatacagaacaaccaagattctgataacaggcttcct
tttgcaaattctggaaatccagttatggcactggtttcctttttagcctctgctgttgga
ccaagagtagctgcaacttgtgctcacgcagcattagctgcattgtcagagaataattca
gggagcgcgtcagatatagaagctctggaaaatgataacagggcaaattcagaaagcata
aataatagagctggtggccatcatggagtggttgcaaactcgagtcagaaaaatgaggac
aagttaaaagtacctggttcatgtgctcaagatgatgctgggtcgaccctgctgtctgct
gagaaagtcaaagatgctgccaaagcaggcctctctgctgcagcaatgaaagctaaattg
tttgctgatcatgaagagcgagaaattcagaggctatgtgctaatattgttaatactaag
ttgaaaagattggaactgaagctgaagcagtttgcagaaattgaaacacagttgatgaaa
gaatgtgaacaagttgagaatctgaggctgaggtttgcttctgaacggtcccatgttgtt
tcagctcgtcttggaaacggtggaaccactcctccaatgaatgtatcaggtgttggtcct
tccatgattaataataataacaacagtaggcagcaaatgatttctgcttcttcctcacag
cctagcatctcagggtatggcaacagccaaccagttcatccacacatgtcctttgtcccg
cggccttcaatgtttggattagggcaaaggttgcccctatctatgatacaacaatcacag
gctgtttcttcaaattcgatgttcaatggccctagtaatgtgcagcctgctcctaatcat
tcgttgtcgaggcctgtgtcaagaactaactctggtttaggttaa
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