Vigna umbellata (ricebean): 124832277
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Entry
124832277 CDS
T09662
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03030
DNA replication
vum03410
Base excision repair
vum03420
Nucleotide excision repair
vum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124832277
03410 Base excision repair
124832277
03420 Nucleotide excision repair
124832277
03430 Mismatch repair
124832277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124832277
03036 Chromosome and associated proteins [BR:
vum03036
]
124832277
03400 DNA repair and recombination proteins [BR:
vum03400
]
124832277
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124832277
DNA Replication Termination Factors
ELG1-RFC complex
124832277
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124832277
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124832277
Check point factors
HRAD17(Rad24)-RFC complex
124832277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
R2K_2
Motif
Other DBs
NCBI-GeneID:
124832277
NCBI-ProteinID:
XP_047162405
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MVYGDHNLSNPTLKQSNVNVSDHQSMSKNHISPNRRRFRSRRRKTTAACPHSSVNLRAYD
VDGTNSPYYKGLTDHSLAIVNTIPSCAQPHPHAPSSYLLSSPYYKGLTDYSLVIRPWTPH
NHPLPFPHNSLSYTPSPYYAGLLTHYTLFFHARSLQPSFTTNLPNIKNPTLKDLMLDPHH
VGFVTQETAQVGNHALEELGEKTAAVVDQENDVDVEMVMTEEKALGESVFEQATDEVEGV
SEEAIFDTKLMSDDDVVEEKPLGEKSSETSEMDLWKEEEVQEVLPLVSSEAVVVSSESDY
TWAAKYQPMALEEFICNKDIASQLKTMVEGGCGCSHFIFEGPPSVGKRSMIRAMLGEVFG
SDRVQVEEEYRNFILKGEMIDSVQVRVKKSLHHVEVNLSETNGYEKHVIVDLFKETYGQV
IDNSQPCYPENCKAIVLYEAEKLSIESLLYIKWLLEKYEGCNKVFFCCSDESKLQPVKPL
CITLRLSSPSTQELATILENIAKAEGIQLSRHLIDTIILRSKNNLRQAIRSLEATCRNRD
AVKENDVILTGWEQDILDIAKKIIQEQSPRQLYAIRRKLRSLMSHDVPPEFIYKSLVPEL
TTLVHHSLRPGIAKLDRDFMRPSEIKFETMKQHFCHVPKQSESDEKNTDSTKKNALTYLK
VEEFIAKVMSWYKNWSEKDSKL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatggcgatcacaacctgtcaaatccaaccttgaagcaatccaacgttaacgtt
tccgatcatcagagcatgtccaagaaccacatctcacccaaccgtcgcaggtttcggtcc
agaaggaggaaaaccaccgctgcttgcccccactcatcggtcaacctccgcgcatacgac
gtcgacggcaccaacagtccctattacaagggtctgactgaccattcccttgcgattgtg
aacaccataccctcctgtgctcaacctcatcctcacgccccttcctcctacctcctttcc
agtccttattacaaaggccttacggactattcccttgttattcgtccctggactcctcac
aaccatcctcttccttttccccacaactccctctcctacacccctagtccttactatgca
ggtcttctcactcactacacccttttctttcatgcacgctcacttcaaccttctttcact
acaaaccttccaaacatcaagaaccctactttgaaggacttgatgctcgatcctcatcac
gttggctttgttactcaagaaactgctcaagttggcaatcatgcattggaggaacttggg
gagaaaactgctgctgtggttgatcaagagaatgacgttgatgttgagatggtgatgact
gaagagaaggccttgggggagagtgtattcgagcaggctactgatgaggttgagggtgtg
tcagaagaagcaatctttgatacaaagttgatgagtgatgatgatgttgttgaagagaag
ccattgggggagaaatcatcggaaacaagcgagatggatttgtggaaggaagaggaagtg
caagaagtgttgcctcttgtttcatcagaagcagttgttgtttcgtctgaatctgattat
acatgggcagccaaataccaacccatggccttggaagagttcatctgcaacaaagacata
gcaagtcaactcaaaacaatggtagaaggtggttgtgggtgcagccactttatatttgaa
ggaccaccaagcgtggggaagagatccatgataagggctatgcttggagaggtattcggc
tccgacagggtccaggtcgaagaagaatatagaaacttcattttgaagggagaaatgatt
gatagtgtgcaagtgcgcgtaaagaaatcactccatcatgtcgaggtgaatctgtcagag
acaaatggatacgaaaaacatgtaattgttgatttattcaaggaaacatatgggcaggtg
atagataactcgcaaccttgttatccagaaaactgcaaagcaatcgttttgtacgaggcg
gagaagctgtcgatagaatcgttgttgtatattaagtggctgctagagaagtacgaaggg
tgtaataaggttttcttctgttgctctgatgaatctaagcttcaacctgtgaagccactt
tgcatcactctccgcctttcatcgccatcaacccaagagctagctacgattttggaaaac
attgcaaaagcagaaggaatacagttatcacgccacttgatcgataccataattttgagg
tccaagaacaacctacgccaggccattcgttcgttagaggccacttgccgaaatagggat
gctgtcaaagagaacgacgtgattctaactggttgggaacaagatattctggatattgcc
aaaaaaataatccaagaacaaagtccacgacagctgtacgccattcgtagaaagctacga
agtcttatgagccatgatgttcctcctgagtttatttacaagtctttggtaccagaatta
accactcttgttcatcactcgctacgcccagggattgccaaactcgacagggacttcatg
agacccagtgaaatcaaatttgaaaccatgaagcagcacttctgtcatgttccaaaacag
tccgaatctgatgagaagaacactgattcaacaaaaaagaatgccttaacttacttaaaa
gtagaagagtttatagcgaaagtgatgagctggtacaagaattggtctgaaaaagacagt
aagctgtag
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