Vigna umbellata (ricebean): 124832726
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Entry
124832726 CDS
T09662
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124832726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124832726
03041 Spliceosome [BR:
vum03041
]
124832726
03036 Chromosome and associated proteins [BR:
vum03036
]
124832726
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124832726
Spliceosome [BR:
vum03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124832726
Complex B
124832726
Complex C
U2 SnRNP specific factors
124832726
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124832726
TFTC complex
124832726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
124832726
NCBI-ProteinID:
XP_047162957
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA
IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADQDSTGQAADEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRNDLPAERGVLIVSAAMHKLKSMFFFLLQ
TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI
GDEDDVEASSATLMETEEGFQPVFFRPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFLIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVMIESDQGALTAEEREAARKQCFEAAQAGENGTGSADQMENGGDDEDK
DDPLSDEHYGYPKAESEKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGT
LLAVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAG
IGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQAYRDRIYVGDVQESFHYCKYRRDENQLY
IFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL
NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS
HLEMHMRQDHPPLCGRDHMTYRSTYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagtctcactctccagcgtcccaccggcatcatctgtgccatcaacggc
aacttctccggcggcaagagccaggaaattgtcgtcgcccgaggcaaggtccttgatctc
ctccgtcccgacgacaatggccggatccaaaccatcctctccgtcgaaatcttcggcgcc
attcgctctctcgctcagttccgcctcatgggcgctcagaaggactacatcgtcgttggc
tccgactccggccgcatcgtaatcctcgaatataacaaagagaaaaacgtattcgacaaa
gttcaccaagaaaccttcggaaaatctggttgccgccgaattgtcccaggtcagtacctc
gccatcgatccaaagggtagggccgttatgattggcgcctgcgagaagcagaaactcgtt
tatgttttgaatagggacactgctgctaggttaaccatttcttcccctttagaagctcat
aaatcgcacactttagtttattcaatttgcggtgttgactgtggctttgagaaccctatt
tttgctgctattgaattggactactctgaggccgaccaggattccactggtcaggctgct
gatgaggctcagaagcatttgaccttttatgagcttgatcttgggctcaaccatgtttcg
cggaagtggtccgagcaggttgataatggggccaatttgcttgttactgttcctgggggt
ggtgatggtcctagcggggtgcttgtttgtgctgaaaattttgttatttataagaatcag
ggtcatcctgatgttagggctgtgattccacggcgaaacgacttgccggctgagcgtggc
gtgcttattgtctcggctgccatgcataaactgaagagcatgttcttcttcctcctgcag
acggagtatggggatatttttaaggtcacattggaacacaacaatgaccgtgtatctgaa
ttgaagattaaatattttgatactattcctgttactgcttcgatgtgtgtgctgaagtca
gggttcttatttgctgcctcagagtttgggaaccatgctttgtatcaatttaagtctata
ggggatgaggatgatgtggaggcatcatctgccacgctaatggaaaccgaggaaggtttt
cagcctgtgtttttccggcccaggaggctgaaaaaccttgtcaggattgaccaggttgag
agtttaatgccaataatggatatgaaggtcagtaatctctttgaagaggaaactcctcag
atttttactctctgtggacgtggtcctaggtcgtctttgaggattttgagaactggttta
gcggttagtgagatggctgtgtccaagcttcctggtataccaagtgctgtttggacggtg
aagaagaatgttattgacgagtttgatgcttacattgttgtgtcattcacaaacgcaact
cttgtgctttccattggtgagactgttgaagaagttagtgacagtgggtttcttgacacg
actccctcccttgctgtttctttgataggagatgattctctcatgcaggttcacccaaat
ggtattaggcatatcagggaggatggccgtattaatgaatggagaacacctggaaagagg
acaatttcaaaagttggatcaaacaggcttcaggttgttattgcactcagtggaggggag
cttatatattttgaagtagatgtaactggtcagttgatggaggtggagaagcatgaaatg
tctggagatgttgcttgtttagacattgctccagttcccgaaggcagacaaagatctcga
tttcttgcagttggctcatacgacaagaccatccgcatcttatcactggatcctgatgat
tgtatgcaggcactaagcgttcagagtgtttcttcagctccagaatctctactttttctt
gaagttcaagcttctgttggtggtgaggatggtgcagatcatcctgctagcctattcttg
aatgctgggttacagaatggtgtgttgtttagaactgtggtggatatggttactggtcag
ctttctgattcacgttccaggttcttaggattgagagccccaaagctgtttctcatcatt
gtgaggggcaagcgggctatgctttgtttgtctagtcgaccctggcttggttatattcac
caaggacatttccttttaacacccctttcgtatgaaacccttgaatatgctgcttcattt
tcatctgaccagtgtgtagaaggtgtagttgctgttgctggcgaggccttgagaattttt
accatagaaaggttaggagaaacatttaatgaaactgtaattccattaaggtacacacca
aggaaatttgtgctgcaacccaaacgaaaactccttgtgatgattgagagtgatcaggga
gcattaactgcagaagagcgtgaagctgctaggaaacagtgttttgaggctgctcaagcc
ggggagaatggtactggaagtgcagaccaaatggagaatggtggtgatgatgaagataaa
gatgatcccctctctgatgaacactatggctatccaaaagctgaatcagagaaatgggtt
tcatgcatcagagttcttgatcccaggacaggaaatacaacatgtcttttggagcttcag
gagaatgaggctgctttcagcatatgcacagtaaatttccatgataaggaatatggaacc
cttttagctgttgggacggcaaagggacttcaatttttgcccaaaaggactgtaactgca
ggatttattcatatttataggtttgtagaggatggaagatctcttgaacttctgcacaaa
acacaggtagaaggtgttcctcttgctctctgtcagtttcaaggaagattacttgcaggg
ataggacctgtgctcaggttatatgatttgggaaaaagacgtctgttaagaaaatgtgag
aataagctattccccaacacgattgtctctattcaggcatatcgtgatcgaatttatgtt
ggtgatgttcaagagtctttccattactgcaagtataggcgggacgaaaaccaactttat
atatttgccgatgattgtgttccaaggtggcttactgcatcgtaccacatagattttgac
accatggcaggcgcagacaagtttggaaatatctattttgtgcggctgccacaggatgtt
tcagatgagatagaagaagatcctactggtggtaggatcaagtgggagcaaggaaagctg
aatggagctcccaataaggtggaagaaattgtacagtttcatgttggtgatgtggtcaca
tgcttgcaaaaggcttctctcataccaggtggtggagagtgcattgtatttggaacagtt
atgggaagtgttggtgctctacatgcctttacttcacgagatgatgttgacttcttttct
catttggagatgcatatgagacaggatcacccacctttgtgcggaagagaccacatgaca
tatagatctacatattttcccgttaaggatgttattgatggggatctatgcgaacaattc
ccaacattgccaatggatttgcagagaaaaattgctgatgaattggacagaacccctgga
gagatactgaagaaactcgaggaagtgagaaataagattatttaa
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integrated database retrieval system
