Vigna umbellata (ricebean): 124832845
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Entry
124832845 CDS
T09662
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic-like isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00500
Starch and sucrose metabolism
vum01100
Metabolic pathways
vum01110
Biosynthesis of secondary metabolites
Module
vum_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124832845
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vum01003
]
124832845
Enzymes [BR:
vum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
124832845
Glycosyltransferases [BR:
vum01003
]
Polysaccharide
Storage polysaccharide
124832845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_1_4
Glycos_transf_1
Ig_PIFI
DUF3592
Motif
Other DBs
NCBI-GeneID:
124832845
NCBI-ProteinID:
XP_047163123
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MEMSLQLNCKAVFPYRSGCVKLNSFPGVLPRRSVTFESGFVCSPCKAGWGVSFVSASADF
PRRRQQKKVAVTRPKGTAAKGFVPSKRNARLKKGDSLTPVVSEVSGGDKKQTVDVNIDDD
KEGGVEFSEDERFEVIDRTDEIVGDVGELLLLDETVDVIESSQANISMTDEDVEVLGLKE
DIPYDGGVGIVQDSGEGFLDHAEIDESVKDTDTDTLGEITEEAVEESSTADDDRIKEEAS
RLLNLELEENQRQQEIESIAEEKVSQGTKLFVYPPVVKPDQHIEVFLNKSLSALSDEPQI
LIMGAFNDWKWKSFSVRLNKTRLNGDWWSCQLYVPREAYQVDLVFFNGENVYDNNDQKDF
RIPIEGGMDALAFENFLLEEKRKELEELARVQAERERQAEEQRRIEADRAAKEEDRSRAR
VEVQRMRETLPQLLKNAVKSIDNVWYIEPSEFKDNDLIRLYYNRSSGPLAHANEIWIHGG
HNNWKYGLSIIERFIKSVLKGDDWWYADVVVPDQALVLDWVFADGPPQKAGVYDNNHKQD
FHAIVPTVTLDEQYWVEEEQLIYRKLQEERRLREEAIRAKAEKTAQMKAETKERTLKRFL
LSQKHIVFTDPLDVQAGSTVTVYYNPSNTNLNGKPEVWFRGSFNRWTHCNGPLPPQRMLP
AENGTHVKASVKVPLDAYMMDFVLSESEHGGVFDNKFGMDYHIPVFGGIVKEPPLHIIHI
AVEMAPIAKVGGLGDVVTSLSRAIQDLNHNVDIILPKYDCLNLSNVKDFEYHRNYLWGGT
EIKVWRGNVEGLSVYFLEPQNGFFQVGCVYGRGNDAERFGFFCHAALEFLLQNGFHPDII
HCHDWSSAPVAWIFKDNYAHYGLSKARLVFTIHNLEFGAQFIGKAMQYADKATTVSPTYS
REIAGNAVIAPHLPKFHGIINGIDPDIWDPYNDKFIPVSYSSENVVEGKRASKEALQQRL
GLKRADLPLVGIITRLTHQKGIHLIKHAIWRTLERGGQVVLLGSAPDPRIQNDFVNLANQ
LHSSHNDRARLCLAYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGG
LFDTVFDVDHDKDRAQAQGLETNGFNFDGADVGGVDYALNRAITAWYDGRDWFNSLCKRV
MEQDWSWNRPALDYLELYHAARKIE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtctttgcaactaaactgcaaagccgtgttcccctacagaagcggttgtgtg
aagctgaactcgtttcctggggtgttacctcgtcgttctgtaacgtttgaaagtggtttc
gtgtgttccccgtgcaaagcaggttggggtgtttctttcgtcagtgccagtgcagatttt
cctcggaggaggcaacagaagaaggtggcagttacaaggcccaaaggcactgctgcaaag
ggttttgtcccaagcaaaaggaatgcaagattgaagaagggagattcattaactcctgtg
gtcagcgaggtttcagggggcgataagaaacaaacagttgatgtgaatattgacgatgat
aaagaagggggggttgaattttcagaagacgagaggtttgaggttatagatagaactgat
gaaattgttggggatgtgggggaattattgttgttagatgagaccgtggatgttattgag
agcagtcaagccaacatttctatgactgatgaggatgttgaggttctcgggttaaaggag
gatattccttacgatggaggtgttggaattgttcaagattcaggagaagggtttttggat
catgccgaaattgatgaaagtgttaaagatacagatactgatacccttggtgaaataact
gaggaagctgttgaggaatcaagcactgctgatgatgatagaataaaggaggaagcttct
cggctgttgaatttggagttggaagaaaatcagcgccagcaggagatagagagcatagca
gaggaaaaagtttctcaagggaccaagctgtttgtgtatcctcctgttgttaaacctgat
caacatatagaagtgttccttaataagagcctttcagcactaagtgatgaaccacaaatt
ctaataatgggggcattcaatgattggaagtggaaatctttttccgttaggttgaataag
acacgtctcaatggagattggtggtcttgccaattatacgtgccaagagaggcctaccag
gtagatttggtgttcttcaacggagaaaatgtctatgacaataatgaccaaaaagacttc
cgcatacccattgagggaggaatggatgcattagcatttgaaaatttcttacttgaggag
aaacgtaaagaattagaagaacttgctagggtgcaagctgaaagggaaagacaagctgaa
gagcaaaggcgaattgaggcagacagagctgcaaaggaagaggacaggtcacgggcgagg
gtggaagttcaaagaatgcgagaaacattaccacaattgttgaaaaatgctgtaaaatca
attgataatgtttggtatattgaacctagcgaatttaaagacaacgacttgatcagatta
tattataacagaagctcaggtcctcttgcacatgctaatgaaatatggattcatggtggg
cacaataattggaagtatggattatcaatcattgaaaggtttatcaaatctgttttaaaa
ggagatgactggtggtatgccgatgttgttgtccctgaccaagctctggtcctggattgg
gtctttgctgatggcccacctcagaaggcaggtgtgtatgataacaatcataaacaagat
ttccacgccattgtccctacagttacacttgatgaacagtattgggttgaagaagagcaa
ctgatatatcgaaagcttcaggaggagaggaggttaagagaggaagctatacgtgccaag
gccgagaaaacagcacaaatgaaagccgaaacaaaggaaagaactttgaaaagatttttg
ctttctcaaaagcatattgtattcacggacccacttgatgttcaagcagggagtacagtg
acagtatattataacccctccaacacaaatctaaatggaaagcctgaggtttggtttaga
ggttcatttaatcgttggactcactgtaatggtccattgcctcctcagagaatgttacct
gcagagaatggtactcatgtcaaagcctctgttaaggttccactggatgcatacatgatg
gactttgtattatctgagagcgaacacggtggagtttttgataacaaatttggaatggat
tatcacattccagtttttggaggtattgtaaaggaaccacctttgcatataatccatatt
gctgtggaaatggccccaattgcaaaagttgggggccttggtgatgttgttactagtcta
tcccgagctattcaggatttaaatcacaacgtggacattattcttccaaagtatgactgc
ttgaaccttagcaatgtaaaggactttgaatatcacaggaactatttatggggagggact
gaaataaaagtatggcgtggaaatgttgaaggtctctctgtctattttctggagcctcaa
aatgggttctttcaagttggctgtgtatatggtcgtgggaatgatgcagagagatttggt
ttcttttgtcatgctgctcttgagtttctactccaaaatggatttcatcctgatatcatt
cactgccacgattggtcaagcgctccggttgcatggatatttaaagacaactatgctcat
tatggtcttagtaaagcacgacttgtcttcactattcataaccttgaatttggagcccaa
ttcattggaaaagctatgcaatatgctgacaaagctacaactgtctctcccacatattca
agagagattgctggtaatgctgtaattgctcctcatcttcccaagttccatggtataata
aatggaatcgatccagatatatgggacccatataatgataaattcattcctgtatcatac
tcatcagaaaacgttgttgaaggaaaaagagcttctaaggaagccttgcaacaaaggctt
ggtttaaaaagagctgatcttcctttagtaggaattattactcgactgactcatcagaaa
gggatccatctcatcaaacatgccatttggcgcaccctagaacgtggtggacaggttgta
ttgcttggttcggccccagatcctcgtatccaaaatgattttgtgaatttggcaaatcaa
ttgcattcctctcataatgatcgtgctagactttgccttgcatacgatgagcctctttcg
cacttgatatatgctggtgctgatttcattcttgttccttcaatctttgagccatgtgga
ctcactcaactaactgcaatgagatacggttcaatacctgttgttcgaaaaactggagga
ctttttgataccgtatttgacgttgatcacgataaggatagagcacaagcacagggtctt
gagacaaatggatttaattttgatggagctgatgttggaggtgttgattatgctctcaat
agggcaataacagcatggtatgatggccgtgattggttcaacagtttatgcaaaagggtg
atggagcaagactggtcttggaaccggcctgctcttgactatttggagctttaccatgca
gcacgcaagatagaatga
DBGET
integrated database retrieval system
