Vigna umbellata (ricebean): 124832851
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Entry
124832851 CDS
T09662
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124832851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124832851
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124832851
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Paralog
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
F-box_5
LRR_6
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
124832851
NCBI-ProteinID:
XP_047163125
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MLKSRKDKSSVSLVCKEWYNAERWSRRSVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRF
SDFNLVPANWGANIHSWLVVFAEKYPWLEELRLKRMTVTDESLEYLALSFPNFKALSLLS
CDGFSTDGLASIATNCKNLTELDIQENGIEDKNGNWLSCFPESFTSLEVLNFANLHNDVN
FDALEKLVSRCKSLKTLKVNKSVTLEQLQRLLVHAPQLGELGTGSFSQELTAQQSSELGS
AFKNCKNLHTLSGLWVATAQYLPVLYSACTNLTFLNFSYAPLNSDDLAKLLVHCPKLERL
WVVDTVEDKGLEAVGSHCPLLEELRVFPADPFDEGIAHGVTESGFIAVSQGCPRLHYVLY
FCRQMTNAAVATVVQNCPDFTHFRLCIMHPGQRDYLTQDPMDEAFGSVVKTCRKLQRLAL
SGYLTDLTFEYIGKYGKNLETLSVAFAGSSDWGMRCVLEGCPKLRKLEVRDCPFGNDALL
AGLGKYESMRSLWMSDCEVTMNGVRELAKEKPRLNVEVINEETYDNQQAKKVYVYRSVAG
PRRDAPPFVLTL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatctcgaaaggacaaaagctcggtttctttggtttgcaaagagtggtataac
gccgagagatggtcaagaaggagtgtgttcataggtaactgctattctgtgtctcctgag
atcctaactcgcaggtttcctaacattcgaagtgtcacactgaaagggaaacctcgtttt
tctgacttcaacttggttcctgcaaattggggtgctaatattcattcatggctggtggtg
tttgctgagaagtacccttggcttgaagagttgaggctcaagaggatgactgttactgat
gagagcttggagtatctggctctctctttccccaatttcaaggccctttcccttctcagt
tgtgacggattcagcactgatgggttggcttcaatcgccactaattgcaagaatttaact
gaacttgacatacaagagaatggtattgaagataagaacggcaattggttgagctgtttt
cctgaaagcttcacatcattggaagtactgaactttgccaatcttcacaacgatgtaaat
tttgatgcacttgagaaacttgtcagtagatgcaaatcattaaagactttgaaggttaac
aaaagtgtaacactggaacaattgcaaaggcttcttgttcatgctcctcagttaggtgag
cttggtactggctcattttcacaagagctgacggcacagcagtcctcagagcttggaagt
gcattcaaaaattgtaaaaatcttcacaccctttcggggttatgggtagctacagcacaa
tatctcccagttctgtactctgcttgcacaaatctaactttcttgaattttagttatgct
cctcttaacagtgatgatcttgctaagctccttgttcactgccctaagcttgagcgtcta
tgggttgtggacacagttgaagacaaggggctagaagctgttggatcacactgtccgttg
cttgaggaactgcgtgtttttcctgcagatccctttgatgagggcattgctcatggggtt
actgaatcagggtttatagcagtctctcaagggtgccctagacttcactatgttctctac
ttttgccgtcaaatgaccaatgctgctgttgctaccgttgtacaaaactgccctgacttc
actcattttcgactgtgcatcatgcaccctggccagcgagattacttgacacaagatcct
atggacgaggcctttggatctgttgttaagacttgcaggaaactccagaggcttgcatta
tcaggttatctgactgacctgacttttgagtacataggaaagtatggaaaaaacttggaa
actctttcagtcgcatttgccggaagcagtgattggggcatgcgttgtgtgctcgagggc
tgtccaaagctgaggaaactcgaggtaagggactgcccattcggcaacgatgctcttctg
gcaggtttggggaagtacgagtcaatgaggtcgctgtggatgtcagactgtgaagtgaca
atgaatggggttagagagttggccaaggaaaagcctaggttgaatgttgaagtcataaac
gaagaaacctacgacaatcaacaggctaaaaaggtttatgtctatcgttctgttgctggg
cctagaagggatgcccctccttttgttctcactctctga
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