Vigna umbellata (ricebean): 124833033
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Entry
124833033 CDS
T09662
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vum01009
]
124833033
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124833033
Enzymes [BR:
vum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124833033
Protein phosphatases and associated proteins [BR:
vum01009
]
HAD phosphatases
Fcp/Scp phosphatases
124833033
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124833033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
ZMYM4
Motif
Other DBs
NCBI-GeneID:
124833033
NCBI-ProteinID:
XP_047163359
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MAKNNAVSVKDAVFKLQMLLFEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNICGYPLC
CNALPTERPRKGRYRISLKEHKVYDLQETYLFCSSNCVVSSKAFAGSLQSERCLALDPEK
LNNILKLFENLNLEQTENVRKDGDLGLSNLKIQEKTVTSSGEVSLEEWVGPSNAIEGYVP
KPRERESKGSRKSVKKGSKAGHDKSNNDKDLVNNEMNFVSTIIMQDEYSVSKASPGQTDT
TAVDRQPEKVGLKMVRKDEDSIQDLSSSFKSGLNLSTSEKEKEVSKSYEAVFKSSPNLAS
KKKDAHSVPISERQYDQEKHNSSRKSVQGKGETSRVTANGGASTSNFDPDNVKEKFQVEK
VGGSCETKLKSSLKSAGQKKPSRTVTWADEKINSAGNKDLCEVKEFGDISKEYESLGNVD
VTDDEDMLRQASAEACAIALSQASEAVASGDSDVTDAVSEAGIIILPHDAVEEGTIEDAD
ILQNDSVTLKWPRKPGVSDIDFFESDDSWFDAPPEGFSLTLSPFATMWNAIFSWMTSSSL
AYIYGRDESFHEEYLSVNGREYPCKVVLSDGRSSEIKQTLAGCLARAFPALVAGLRLPIP
ISTLEQGMACLLETMSFVDALPPFRTKQWQVVTLLFVDALSVCRIPALISYMTDRRSLFH
KVLSGSQIGIEEYEILKDLVVPLGRAPHISAQSGA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaacaacgccgtttctgtcaaagatgcagttttcaaattgcaaatgttactc
tttgaaggcattcaaaatgaagatcagctgtttgctgctggatctttgatgtcaaggagt
gactatgaagatattgtaacggaacggtccatcacaaatatttgtggttacccactctgc
tgcaatgctttgccgactgagcgacctcggaagggtagataccggatttcactgaaggag
cacaaggtctatgacctacaagagacttacctattttgttcttcaaattgtgttgttagc
agcaaagcttttgctgggagcttgcaatcggagagatgcttagctttagacccagaaaag
ctaaacaacatacttaagttatttgagaatttgaatctggaacagacagaaaatgtgcga
aaggatggagatttaggtttgtccaatttgaaaattcaggagaaaactgtaacaagcagt
ggggaggtgtctctggaggagtgggttggaccatcaaatgcaattgagggatatgtgcca
aaaccaagggagcgtgaatctaagggttcacggaaaagtgttaaaaaagggtccaaagct
ggtcatgacaagtcaaacaatgacaaagatttagttaacaatgagatgaacttcgtgagt
actattattatgcaagatgagtatagtgtttcaaaagcatccccaggtcaaacagataca
acagctgtagacaggcaacctgaaaaggttggccttaaaatggtcaggaaagatgaggat
agcattcaagatctgtcttcatcttttaagagtggtttaaatttaagtacctcagaaaaa
gagaaggaagtatccaaatcatatgaagcagtgttcaaatcctctccgaatctggctagt
aagaagaaagatgcgcattctgttcccatatcagaaagacaatatgatcaggaaaagcat
aattcctcaaggaaatcagtgcaaggtaaaggggagacaagtagagttactgctaatggt
ggtgcttccacttccaattttgatcctgacaatgttaaagagaaattccaagtagaaaaa
gtgggtggatcgtgtgagactaaactcaaatcttcccttaaatctgctggtcaaaagaaa
cctagccgcactgttacttgggcggatgagaaaatcaatagtgctgggaataaagatctt
tgtgaggttaaagaatttggagatattagtaaagaatatgagtcactaggtaatgtagat
gttactgatgatgaggatatgctacgtcaagcatcggcagaagcttgtgcaattgcatta
agccaagcatcagaagcagttgcatctggagactcggacgtcactgatgctgtttctgaa
gctggaattattatattgccgcatgatgctgttgaggaaggtactatagaggatgctgat
atactacaaaatgattcagttactctgaaatggccaagaaagcctggagtttcggacatt
gatttctttgaatctgatgactcatggtttgatgctccaccagagggtttcagtttgact
ttatcgccttttgcaactatgtggaatgccatcttttcgtggatgacatcatcttctttg
gcatatatatatggaagggatgaaagttttcatgaagaatacctatcagtcaatgggaga
gaatatccttgcaaagttgtcttgtcagatggtcggtcatctgaaataaagcaaacatta
gcgggttgtcttgctcgagcttttcctgcacttgttgctggtcttcgactgccaatacca
atatccaccttggagcaagggatggcatgcttgctggagacaatgtcatttgtggatgca
cttccacctttcagaacaaagcaatggcaagtggttactcttttgtttgttgatgcattg
tccgtttgtagaatacctgctcttatctcatacatgacggataggaggtctttgtttcac
aaggttttgagtggttctcaaataggtatagaagaatatgagattttgaaggatcttgta
gtaccactgggccgggcacctcatatctctgcccaaagtggggcatga
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