Vigna umbellata (ricebean): 124833368
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Entry
124833368 CDS
T09662
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124833368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124833368
03036 Chromosome and associated proteins [BR:
vum03036
]
124833368
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124833368
Coactivators
SAGA/TFTC/STAGA complex
124833368
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124833368
STAGA complex
124833368
TFTC complex
124833368
SAGA complex
124833368
SLIK complex
124833368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
TAF4
Motif
Other DBs
NCBI-GeneID:
124833368
NCBI-ProteinID:
XP_047163794
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MSIVPKETIEVIAQSIGISSLSPDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTILTADD
VDVALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIEDKDVDLKEVIEASLPKAPLDTAV
TCHWLAIEGVQPAIPENAPIEVISAPSDTKKHEQKDDDLPVDIKLPVKHVLSRELQMYFD
KVAELTLSESDSALFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVV
SSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGSRLADNHWELRDFTANLVASICKRFGHV
YSNLQYRLTKTLLNAFLDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLETYMRLLEPEM
LLEKQKNEMKRHEAWRVYGALLRAAGQCIYDRLKMFPTFSTPSPSAVWKTNAKVLTSSSR
KREADPDQLEQQPPLKKTATDGEVGVVPMNSSPAHKQEEAETRASPVDSIIGSSSSAQMK
NETSLDGELRSNRGDTQASKTSAALTQVWKDELNSGRILVSLFDLFGEGILSFIQAPEMY
MFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgttcccaaagagacgatcgaagttatagcgcagagcattgggataagctcc
ttgtctcccgatgtcgctctcgctgtcgctcccgatgtcgaataccgcatgcgccagatt
atgcaggaggcaattaagtgcatgcggcattctaagagaaccattctcactgcggatgat
gttgatgttgctctgaacttgaagaatgttgaaccaatatatggatttgcatctggtggt
cctttgcggttcaaaagagctgttggacacagggacttgttttatattgaggacaaggat
gtagatttaaaagaggttattgaagcttctttaccaaaagcacctcttgatactgcagtt
acatgccactggctagccattgaaggtgtgcaacctgctattccagaaaatgctcctata
gaagtaatttcagctccttctgataccaaaaagcatgagcagaaagatgatgaccttcca
gttgacatcaaattgcctgttaagcatgtattatccagagaacttcagatgtattttgac
aaagttgctgagcttactttgagtgagtctgattcagctctctttaaagaagcattagta
agtttggctactgattcaggacttcatccactagttccatatttcacatgctttatagct
gatgaggtttcacgtggtttgaataattttcctcttctatttgccttgatgcgagttgtt
agtagccttctgctaaaccctcacatccatattgaaccttatctacaccagttgatgcca
tctgttgtgacctgcctcgttgctaaaaggttgggcagtaggttggcagacaaccactgg
gaacttagagactttacggctaacctggttgcctcaatatgcaaaaggtttggacatgtc
tatagtaatctccagtatcgtttgactaaaacattgctgaatgcattcttggatcctaag
aaggcaatgacgcaacactatggcgcgattcaggggttgggggcactgggacccaatgtg
gttcgccttcttttgctgccaaaccttgagacatatatgcgacttcttgaaccagagatg
cttctggagaagcagaaaaatgaaatgaaaaggcatgaagcttggcgtgtttatggagcc
ttgctgcgtgctgcaggtcagtgtatatatgatcgactaaagatgttcccaactttttca
actccttctcctagtgctgtctggaagaccaatgcaaaagttcttacttcttcatctcgt
aaacgcgaggcagaccctgaccaattggaacagcagccacctttgaaaaaaactgctacc
gacggagaggttggtgtggtcccaatgaattcctcacccgctcacaagcaagaggaggca
gagactcgagcttctccagttgattcaattattggttcatcatcttctgcacagatgaaa
aatgagacttctttagatggcgaacttagaagtaacaggggtgatactcaggcatcgaag
acatctgctgctctcacccaggtttggaaagacgagcttaattctggacggatcctggta
tcactgtttgacttgtttggtgaaggaattctttctttcattcaggctcctgagatgtat
atgttcttgtaa
DBGET
integrated database retrieval system
