Vigna umbellata (ricebean): 124833655
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Entry
124833655 CDS
T09662
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124833655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124833655
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124833655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
124833655
NCBI-ProteinID:
XP_047164139
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKNMAENKAKCFDCGAIVTRLIREYS
VRATSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL
EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAANNGPAAFGERGRFDDKEIIVGGGGKSRKKTDEDDESHVSDKG
EEDEDEEVARRSRLGLNKKGGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG
NDPAEREDLAPEVPAPPEIKQDDEDEDEENEEGGGLSKSGKELKKLLRTSGLNESDAEDD
DYDDDVDDEAGVPPVIASKQKDAPKEEPTDNSPSKPVVTGTARGTLSISKPSKGKRKFNE
ETKATTGAPPKKVKIENEPKSIVKDENGSASKNNTPAKGVPPAPSSKGGSSPIPSGPVSE
EEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKRAFADILKRISKIQKTNTSSYVILRDR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgacctgctgttgaagccaacgtgtggcggatgtggttcaaccaccgatctt
tatggaagcaactgcaaacacatgactctgtgcttgacctgtggcaagaacatggcggag
aacaaggcaaaatgctttgattgtggcgccatcgttactcgcttgattcgagagtatagc
gttcgcgctacctctggtagtgacaaacattacttcattgggagatttgtatctggtttg
cctgacttttcgaagaagaaaagtgctgaaaacaagtggtccttgcagaaggagggatta
cagagccgccaagttaccgatgctttgcgggagaagtacaagaacaaaccatggctcttg
gaggacgaaactggtcagtctcaattccagggtcatctcgaaggtgcacaatcagctacg
tattacctgctcatgatggaaagaaaggaatttgttgccattcctgctggttcttggtac
aattttaacaaagttgcacaatataaacaattgacattggaggaagcagaagagaaaatg
aagaacagaaagaaaactgctgatggatatgaaagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacgtgggaggtttgatgacaaggagatcattgtgggcgga
ggagggaaaagccgtaagaaaactgacgaagatgatgaaagccatgtatcagataaagga
gaagaggatgaagatgaggaggtagcaaggaggagtagacttggactaaacaaaaaaggt
ggtgatgatgatgaagaaggtccgaggggaggagaccttgatctggatgatgatgatatc
gaaaagggtgatgattgggagcatgaagagattttcactgatgatgatgaagctgttgga
aacgatcctgcggaaagggaagatttggctcctgaagttcctgctcctccagaaatcaag
caggacgacgaggatgaagatgaagaaaatgaagaagggggaggcctgagtaaatctggg
aaagagctgaagaaactgctacgtactagtggtcttaatgaatccgatgctgaagatgat
gattacgatgatgatgtggatgatgaggctggcgttcctcctgtgattgcttcaaagcag
aaggatgcacccaaggaagaacccactgacaatagcccttcaaaacctgtagtaacagga
actgctcggggaactttatccatttcaaagccttcaaaagggaagagaaaattcaatgag
gaaacaaaagccactactggtgcaccaccaaagaaggtcaaaatagaaaacgaaccaaaa
tcaattgtgaaagatgaaaacggttctgcatctaaaaataacacccctgcaaaaggtgta
ccaccagcaccatcatctaaaggtggttcttcccccataccttctggacctgtgagtgag
gaagaaatcagggctgttttgatgcagaagactccattgaccacacaggaccttgttgct
aaattcagagcaaggctaagatgtccagaggataaaagggcttttgcggatatcctgaag
agaatctccaagatacagaaaacaaatacatccagttatgttatattgagagataggtga
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