KEGG   Vigna umbellata (ricebean): 124833665
Entry
124833665         CDS       T09662                                 
Name
(RefSeq) LOW QUALITY PROTEIN: helicase and polymerase-containing protein TEBICHI-like
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vum03400]
    124833665
Enzymes [BR:vum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124833665
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    124833665
SSDB
Motif
Pfam: POLQ_helical HTH_61 Helicase_C DEAD Helicase_dom4_arc DIKK1-2-4_C-subdom1 OHCU_decarbox HHH_5
Other DBs
NCBI-GeneID: 124833665
NCBI-ProteinID: XP_047164155
LinkDB
Position
Unknown
AA seq 1703 aa
MASPTHRTRLDQFYVSKKRKAEAPVRKAGRSEKGAKQGADASPSSKGTLDGYLISSQDGD
GDVNSATAPKTTVKRNLASEIGTSLANGHNKHTVLSAQGFGDFQTSGPSEFGQSAAKLEL
EQFAAGFLSLYCSELHPSVDFPSEMKVDEHKSHGTVAEGHSCLPQKSKCTAREPGFGVEN
VSLNVKIDEDVKSGVVGNNTMGYVPISCSKVSGCGDTAAFETGFRKCSNTPKMSRNMAEC
YTPGSLIVKARVKETPKSVHGSSSFSPGEAFWNEAILLADSLCVPMDNDPSKAMGESNVV
EDGPEMKNSCNLQNYDGKPRKILDQSKSRIWNMETGTPFRLVGMHTKDSVKEASSLPVKH
FDFSFEDNSLEENTMQNGHGDQGNVAYMACKQYESGPTTSHTYEKKNEVQEKTLVNKLRN
RNCHGNVSMTSIPPHNEVRTPINAQETDEANTPSTSVSFNDHFDLNSWLPPEICNIYRKK
GISNLYNWQVDCLQVDGVVQRRNLVYCASTSAGKSFVAEILMLRRVITTGKMALLVLQYV
SICAERFSSGLLISIGQTCRSFNGNQGGGTLPKDTSVAVCTIEQGNSQLXNCLEEGRLSE
WELIVIEELHMVGDPERYLLELMLTKLRYAAGEGIPKSSDGESSGGSSDKADPAQGLQIV
GMSATMPNVAAVADWLQAALYQTEFRPVPLEEYVKVGNSIYSKNMELSRTISKVADLGGK
DPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHIAKFLKRFTGDVNGCEFADIGSAIN
ALRKCPGGLDPILEETLHSGVAFHHAGLTVEEREIVETCYRKGLIRVLTATSTLAAGVNL
PARRVIFRQPRIGCDFLDGTRYKQMAGRAGRTGIDTKGESILICKPDEVKKVTTLLNESC
PPLHSCLSEDMNGMTHAILEVVAGGIVQTASDINRYVRCTLLNSTKSFQDVVKSAQESLR
WLCQRKFLEWNEDTKLYNTTPLGRASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVY
LVTPINVDVEPNWELFYEHFVRLSPLDQSVGNRVGVTEPFLMHMAHGAPLRASNKSKHNT
RSLHCQQRNRPGISNSTTNYDDQTLRICRRFYVALILSLLVQETPVGEVCEAFKVARGMV
QSLQDNAGRFASMVAVFCERLGWQDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRAR
SLYKAGLRTPLAIAEASIPEIVKALFESSSWATEGSAQRSFQFGLAKKIKNGARKIVLDK
AEEASNAAFSAFKSLGFSVPQFAPRMLSTATHDSIRQEAGSTSGSDTTDTSHNFVDANHM
VNSNKFTSDKEREELIKLSVSGALASVEGKSSNKMLCSLSTFPVAGPTMDEHNGTFDLAK
NLDMSNFSAPFLEPKDKSCVHDGCHAHCTEEQLKNENLASGNSGCSSKKGPINAVSCPGG
LDSFLDIWDTVPEFYFDIHYIKRLELHSAVPFEICGIAVCWENSPVYYVNLPRDILFSDK
AKDDCLSMSTCSDKQKVSSSKCNKDLEIARHRWSRISKIIGKRNVRKFTWNSKIQIQVLK
SPAFPVQRFRGLDIPGTSVNLEVIDNSYVLFPPIHVQDAIDLCIVAWILWPDEESSYTPD
LDKEVKKRLSSEEAAVANHSGRWRNQMRRAAHDGCCHRVAQTRALCSVLWKLLVSENLAE
VLIGIEIPLVRIYRNSNLHQILF
NT seq 5112 nt   +upstreamnt  +downstreamnt
atggcttctcctacgcatcgcacgcgcctcgatcagttttacgtgtcaaagaaaaggaaa
gctgaggcgccggttcgtaaagcgggaagatccgagaaaggtgccaagcaaggggctgac
gcgtctccgagttccaaaggcactttggacggttatttgatttcgtcgcaggatggagat
ggtgacgttaacagtgccaccgccccaaaaaccacagttaagagaaatttggcatcagag
atcggtacttctcttgccaatggacataataagcatactgttttatcggctcaagggttt
ggtgattttcaaactagtgggccgagtgaattcggacagagtgccgcgaaattggagctc
gaacagtttgcagctggctttttgtctctgtattgcagtgaattgcatcccagtgtggat
ttcccttcagagatgaaagtggatgaacacaagagtcatggtactgtggcagagggacat
agttgtttaccacagaagagtaagtgcactgccagagagccaggttttggtgttgaaaat
gtatcattaaatgtcaagattgacgaagacgtgaagtctggtgttgtcggtaataatact
atgggatatgttcctatctcttgttcgaaggtttctggttgtggtgacactgctgccttt
gagacaggctttagaaagtgtagtaatacacctaaaatgtctaggaatatggctgaatgc
tatacaccggggtctttgattgttaaagctagggttaaggagactccaaagtcagtacac
ggaagctcatcattttcacctggagaggcattttggaatgaggcaattttacttgctgac
agtttgtgtgttcccatggataatgatccttctaaggctatgggggaaagtaatgtggtg
gaagatggacctgagatgaagaactcatgcaatttacaaaattatgatggcaagccaagg
aaaatattagatcaaagtaaaagcagaatctggaatatggaaacaggcacacctttcagg
ttagtggggatgcacacaaaagattctgtgaaagaagcatccagccttcccgtgaaacat
tttgatttttcgtttgaggacaacagtttagaagaaaataccatgcaaaatggtcatggt
gatcagggcaatgttgcttacatggcttgtaaacagtatgaatcaggtcctaccacaagt
catacttatgaaaagaagaatgaagtacaagagaagactttagtaaataaattacgaaac
agaaattgtcatggtaatgttagtatgacatctattccaccccacaatgaggttaggaca
ccaattaatgcacaagaaactgatgaagcaaatactccttcaactagtgtatcgtttaat
gatcattttgacctaaatagctggcttcctcctgaaatatgcaacatatataggaagaaa
ggaatatcaaacctgtacaattggcaggttgattgccttcaagtggatggtgtcgtacag
agaagaaatcttgtatattgtgcttctacaagtgctggtaaaagttttgttgctgagatt
ttaatgttgcggagggtgataacaactggaaaaatggcgctacttgttctccaatatgta
tcaatttgtgcagaaaggttctcttctggcttgctaatatccattggtcaaacctgtcgt
agttttaatggaaaccaaggtggtggaacacttcctaaagatacttctgtagctgtctgc
acaatagagcagggcaactcacaattanntaattgtttggaagagggtcgtctgtcagaa
tgggaattaatagtgattgaagaacttcacatggttggtgacccagaaaggtatcttcta
gaacttatgttgacaaagcttcgttatgcagcaggggaaggtattccaaagtcaagtgat
ggagaaagttcaggtggaagcagtgacaaagctgatcctgcacagggtctgcaaattgtg
ggaatgagtgcaacaatgccaaatgttgcagcagttgctgactggcttcaagcagcacta
taccagacagagttccggccagttccactggaagaatatgtaaaagttggtaactccatt
tacagcaaaaatatggaactttctagaacaatctcaaaagttgctgaccttggaggtaaa
gatccagatcatgttgttgaactatgtaatgaggttgttcaagagggacaatcagtgtta
atattttgctctagccggaagggttgtgaatcaactgcaaggcacattgcaaagttcctt
aaaagatttactggtgatgttaatggttgtgagtttgctgatattggttctgctattaat
gccttgagaaagtgtccaggtgggttggaccccatattggaggaaactcttcattctggt
gttgcatttcatcatgctggccttacggttgaagagagagagattgttgaaacctgttat
cggaagggtcttatacgtgttttaactgccacatcaaccttagcagctggggtaaatctg
ccagctaggagagtgattttccgccaacctagaattggttgtgattttctagatgggacg
aggtacaaacagatggctggtcgtgctggtcgaactggaattgatacaaaaggagaaagt
atacttatctgtaaaccagacgaagtgaaaaaagttacaacacttcttaatgaaagctgt
ccccctttacattcttgtttgtcagaagacatgaatggaatgacacatgcaatcttagaa
gtagtggctggaggaattgttcaaactgctagcgatattaaccgttatgttagatgtact
cttttgaattctacaaaatcatttcaagatgtagtaaaatctgcacaagaatcccttaga
tggttgtgccaaagaaaatttcttgaatggaatgaagatactaaactgtataataccaca
cctcttggacgagcatctttcggaagttctctttgtccagaagaatcacttattgtgtta
gctgatctctcaagggcaagggaaggatttgtccttgcatctgacttgcatttagtttac
ttagtgacaccaatcaatgttgatgtggagccaaattgggaattgttctatgagcatttt
gtgagattgtctcctcttgaccagtcagttggcaatcgagtaggtgtgacggaaccattc
ttgatgcatatggcgcatggtgcaccactacgcgcttctaacaagtcaaaacataataca
agatcattgcactgtcaacaaagaaaccgacctgggatttccaattcaacaaccaactat
gatgatcaaacacttcgtatttgtagaagattctatgttgcactcattttgtcacttcta
gttcaggaaactcctgtgggtgaagtttgtgaagcgttcaaagttgccaggggaatggtc
caatccttgcaagataatgcgggtaggtttgcatctatggttgctgtgttttgtgagaga
cttggttggcaagatcttgaaggcttagttgctaagtttcaaaatcgtgtatcttttgga
gttagagcagagattgtagaacttaccaccattccctacgtgaaaggttcccgagccaga
tcactctataaagcaggtttacgtacacctcttgcaattgctgaagcatccattccagag
atagtaaaagcactttttgaaagttcttcgtgggccacagaaggttctgcccaaaggagc
tttcaatttgggttagcaaaaaagataaagaatggtgcacgcaagattgttcttgataaa
gctgaggaggctagtaatgctgctttctcagcctttaagtctcttgggtttagtgtaccg
cagtttgctcctcgcatgttatctactgctactcatgattctatccgccaagaagctgga
agtacctccggaagtgacacgactgacactagtcataattttgttgatgcaaatcacatg
gttaattctaataaatttacttcagataaagaaagagaagaactaattaaattatctgtt
agtggtgctctggcttctgtggaaggaaaatcaagcaacaagatgctatgtagcttgtcc
acctttcctgttgctggacctacaatggatgagcacaacgggacttttgaccttgctaaa
aatctagacatgtccaacttctctgctccatttctggaaccaaaggataaatcttgtgta
catgatggctgccatgctcattgtacagaggaacagcttaagaatgaaaatttggctagt
ggtaattctggttgttcaagtaagaaaggtcccattaatgcagttagttgtccaggtggg
cttgattcatttttggatatatgggacactgtgccagagttctactttgatatccattac
atcaagcgtttggaattgcactctgctgtcccctttgagatatgtggcatagctgtttgt
tgggaaaactctcctgtgtattacgttaatcttccaagagatattctgttttctgacaaa
gcaaaagatgattgtttatccatgagtacatgcagtgataaacagaaagtttcatcttct
aagtgtaacaaagatttagagattgctagacacaggtggagcagaattagtaaaataata
gggaaaagaaatgtaagaaagttcacctggaattcgaagattcagattcaggtgctgaaa
agtcctgcatttcctgttcagagattcagaggtttggacatacccggaacaagtgtgaac
cttgaagtcatagacaattcatatgtgttatttccccctattcatgttcaggatgcaatt
gatctatgtatcgtggcttggattctttggcctgatgaagagagtagctatactccagac
cttgataaggaggtgaagaagaggttatcctctgaggaagctgcagttgccaatcacagt
ggtagatggaggaatcagatgagaagggctgctcatgatggttgctgtcatcgggttgct
caaacacgggcattatgttctgttctttggaaattacttgtttctgaaaatcttgctgaa
gtgcttataggaatagaaatcccattggtaagaatttataggaatagtaatttacaccaa
attttgttttaa

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