Vigna umbellata (ricebean): 124834173
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Entry
124834173 CDS
T09662
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124834173
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124834173
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF6631
Motif
Other DBs
NCBI-GeneID:
124834173
NCBI-ProteinID:
XP_047164766
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MESLSLRLFTLTVLLAVLFSAASNAVNESEITKHKATESRDVVEEKKLRGQSLKNSSMAE
SLEDALNEHAIDNPEEIASMVDESIRNSTARRNLNFFSCGTGNPIDDCWRCDKRWYLRRK
KLANCGIGFGRNAIGGRDGRYYVVTNPNDDDPVNPKPGTLRHAVIQDQPLWIVFKRDMVI
TLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPS
HYGWRTLADGDGISIFGSSHIWIDHNSLSSCSDGLVDAIMGSTAITISNNYFTHHNEVML
LGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPT
INSQGNRYLAPLNPFAKEVTKRVDTGASVWKSWNWRSEGDLLLNGAYFTSSGAGAAASYA
RASSLGAKSSSLVGTLTSGAGVLDCRRGNMC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagtcattgtctctcagactcttcactctcaccgttctgcttgcggtgttgttttct
gctgcctccaacgcagtcaatgaaagtgagatcaccaaacacaaggccacagaatcaagg
gatgtggttgaggaaaagaagttgcgtggtcagagcttgaagaattcgtctatggcagaa
agtttggaggatgctttgaatgaacatgcaattgataatccagaggagattgcttctatg
gttgatgagagcatccgcaattcgacggctcgaaggaatctgaatttcttctcatgcggg
acggggaacccaatcgatgactgctggcggtgcgacaagcggtggtacctccggcgaaag
aagctcgccaactgcggcatcggcttcggccgcaacgcgatcggcgggcgcgacggccgc
tactacgtggtgacgaatccgaacgacgacgaccccgtgaacccaaaaccgggaacgctc
cggcacgccgtgattcaggaccaacccctgtggatcgtgttcaagagggacatggtgatc
acactgaagcaggagctgataatgaacagcttcaagaccatcgacgggcgcggcgtcaac
gtccacatcgcctacggcgcgtgcataaccatccagttcatcaccaacgtcatcatccac
ggcctccacattcacgactgcaagccaacgggcaacgccatggttcgcagctccccctcc
cactacggatggagaacgctcgctgacggggatggcatctccatctttggttcaagccac
atttggatcgaccataactccctctccagttgctctgatggactcgtcgacgccattatg
ggctccactgccattaccatctccaacaactacttcacccaccacaacgaggtcatgctt
ctgggtcacagtgactcttatgtccgcgacaagcagatgcaagtgaccattgcttacaac
cattttggggagggacttatccaaaggatgcccaggtgcagacacgggtatttccacgtg
gttaacaatgactatacccactgggaaatgtatgcaattggtggcagtgctgatcccaca
attaacagccaaggcaacagataccttgctcctttgaacccttttgccaaagaggtaaca
aagagagtagacacgggtgcatccgtatggaaaagttggaattggaggtctgaaggagac
cttttgctgaatggagcctatttcacctcttcgggagcaggagctgcagcgagctatgct
agagcctcaagtttgggggcgaaatcatcttctttggttggtacccttacctctggagct
ggtgttcttgactgtcgcaggggtaacatgtgttaa
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