Vigna umbellata (ricebean): 124834603
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Entry
124834603 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124834603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124834603
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124834603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_12
TPR_7
TPR_2
TPR_1
PrmA
Motif
Other DBs
NCBI-GeneID:
124834603
NCBI-ProteinID:
XP_047165275
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MANEDLSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLESLSKKIKSKTVRTEAPSQSI
AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSTLGTLPGQIASVSST
PQVSSGSSSMEIVPLTGRPIVEKKASVYAEVVKNLNKARKSGLPFKPAAAFKGAYENLGI
DASSGKSVTMRKIWHLVQMLMDEDSAPRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHPA
QAALGGGVGNLQRIRAFLRIRLRDYGVLDFDASDARRQPPIDTTWQQIYFCLRSGYYDEA
RNIALSSRASHQFVPLLTEWINTGGMVPKETASTASEECEKMLRTGDRVGRTAYDKKKLL
LYAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDGLIPYSLDD
LQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAVHLSIVL
ADHGVLSEGAGSGQKFGMMDAYAEVSTIIRQYGSMYLRLGDLQMALEFYAQAAAAVGGGQ
LSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGSGEEGELGRFVTDPKAREQ
FLIEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAISSLFRGRLDGESRTAGL
IHSGNEILETYTYYPDVSLQEREHVFEQQTVLRQLESILSIHKLARLGHYIDALREVAKL
PFLPLDPRSPDSAVEAFENLSSHVQACIPDLLKVALTCLDNVTDSDGSLRALRAKIATFI
ANNLKRNWPRDLYERVAQRL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagacttgagtagttggactgatcttctacattcttcaacgaagcttcta
gaacaagctgctccttctgctcagttccctccacttcagaggaacttagatcaactggaa
tccttatccaagaagattaaatccaaaaccgtaaggactgaggcaccctctcaatctatt
gctgcaacaaggctccttgctcgtgaggggataaatgcagagcaacttgcaagggatctg
aagtcatttgaactgaagacaacttttgaggatgtttttcctgtcgaggcaacaagtgtt
gaagagtatctgcagcaggttcatgaaatggcaatggtctctgccgtacaggaagcccaa
aaggataatctcaggagtttcaatgattacatgatgaaagttttagaggaggattggcaa
aaagaaaagcgtgatttccttcagagtttaagtcgaatttcaacattacctaggacaaac
attgctgctaacagcactctgggtaccctcccaggtcaaattgcatctgtgtcttctact
ccacaagtttcatctggtagttctagtatggagattgttcctctgactggcagacctatt
gtggagaaaaaggcatctgtgtatgcggaggtagtgaagaatctgaataaagcaaggaag
tctgggttaccatttaaacctgcagcagctttcaagggtgcatatgaaaatttgggcatt
gatgctagtagtggaaaatcagtaaccatgcgaaagatatggcaccttgttcagatgctg
atggatgaggactcagccccacgtgtttcaaaacggatgtcattgattattggtgcaaga
cgccaccttgaatggggacatgaaaaatacataatggacaccatacaaagccatcctgca
caagctgctcttggtggcggtgttgggaatttgcaaagaattcgtgcctttcttcggatt
cggttgagggattatggagtactggattttgatgccagtgatgctcggaggcagcctcct
attgataccacatggcagcagatatatttttgcctgaggtctggttattacgatgaagca
agaaatattgccctgtcttcacgtgcttcacatcaatttgttcctttgctcacagagtgg
attaatactggagggatggtcccaaaagagaccgcaagtactgcatcagaggaatgtgaa
aaaatgttgagaactggtgaccgggttggtcgaactgcatatgacaagaaaaagttactt
ttgtatgccatcatatcaggctcccgaagacatattgatcgcctgcttagagatcagcca
actctctttagtacaatagaagatttcttgtggttcaaattgtcagcagtgcgggattgt
cctagtggaccttcatccattgttctaagcgatggtctgattccgtacagcctggatgat
ttgcaaagttacctgaataaatttgagccctcatactatacaaaaaatggaaaagaccct
ctggtatatccctatatcttgcttttaagcattcagttgcttccagctgtattatacttg
tctaaggaagcaggagatgaaggatataacattgatgctgtacacctatcaattgtgcta
gctgatcatggggtcctttctgaaggtgctggttctgggcaaaagtttggaatgatggat
gcttatgcagaagtatccaccattatcaggcaatatggatctatgtatttgcgtcttggt
gatctccaaatggccctagaattttatgcacaagctgctgcagcagttggtgggggccag
ttgtcatggactggtagaggtaatgttgatcagcagaggcagagaaatctgatgctgaag
cagcttctcactgaactattattaagggatggaggcatatatcttttacttggtgcaaga
ggttcaggagaagaaggtgaattgggacgttttgtgaccgatccaaaagccagggaacaa
tttttaattgaagctgcatgccagtgtcaggaggctgggatgtatgacaaatctatagaa
attcagaagagagttggttccttctccatggctctagataccatcaacaaatgcctttct
gaagctattagttcccttttccgtggaagattagatggtgaaagccggactgctggcctc
attcattctggcaatgagattttggagacatatacttattatccggatgtcagtcttcaa
gagagagaacacgtttttgagcagcaaactgtgttacgacaacttgagtcaatattgtca
attcacaaattagcaagactggggcattatatcgatgcattaagggaggttgctaaactt
ccatttcttcctctagatcctcgaagccctgatagtgctgttgaagcgtttgaaaattta
tcttcacatgtccaagcttgtattccagatcttttgaaagttgccctcacatgtctggac
aatgtgacagactctgatggatcgcttcgtgccttaagggctaagattgcgacttttatt
gcaaataatttaaagaggaattggcctcgtgatttgtatgagagagttgcccagaggttg
tga
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