Vigna umbellata (ricebean): 124834614
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Entry
124834614 CDS
T09662
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124834614
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vum01002
]
124834614
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124834614
03036 Chromosome and associated proteins [BR:
vum03036
]
124834614
03400 DNA repair and recombination proteins [BR:
vum03400
]
124834614
Peptidases and inhibitors [BR:
vum01002
]
Metallo peptidases
Family M67
124834614
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124834614
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
124834614
BRISC complex
124834614
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
124834614
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
124834614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
124834614
NCBI-ProteinID:
XP_047165290
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MSLTSVKMSEEVWLSCLTHALSTETEEIMGLLFGDIQHSKNGNVTALIWGASPQKRSDRR
KDRVETDPELLAAATALAERMTTATGTTTRVIGWYHSHPHITVLPSHVDVKTQATYQLLD
SGFIGLIFSCFSEDVNKVGRIQVIAFQSYDGRQNQLSGPIPLSLVNRSPIIDIDSSPSSS
ENLSIIPGYFKAERSLQDTGDSTNSGPSKDGGRSDLGNFFANADANYHPNNSDTNIVDVD
PMDMSDSMQEAMHRSNLDTRGAQNARKEVPLHVVPALSIINLESPLSSYADLQHVLFEEE
RSAYTQAISQNTRDGKIHPLTFIHHTSTYQASLCKFIEYCLSPAISTLQDRLRDNQIRLS
VLSEEAKSLEAESYRGSEAGTGSPRQVASPTHRGGSSPGLRNLHGSPEPSGSRKVASPGS
RSRKGY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaacgagcgtgaaaatgtcggaagaagtgtggttaagttgcctcactcatgca
ttgtccactgaaaccgaagagattatgggtcttctttttggggacattcagcattcgaaa
aacgggaacgtgactgcattgatctggggggcgtctcctcagaagaggtctgatcggcga
aaggatcgagtggaaaccgaccctgagctcttggccgctgcaactgccctcgctgagcga
atgaccacagccactggaactacgacaagggtaattggttggtaccattcacacccgcac
attacagttctcccttcccatgttgatgtaaaaacccaggcaacgtaccagcttcttgac
tctggatttattggcttgattttttcctgtttcagtgaagatgtaaacaaggttggaaga
attcaagtaattgctttccagtcatatgatgggaggcagaatcagttatcaggacccata
cctttgtctcttgtaaatagaagccctattatcgatatcgattcatcgccaagttcttca
gagaatttatcaataatacctggttacttcaaggcagagaggtctttgcaggacactggt
gattcgacaaatagtggtcctagtaaggacggtgggagatcagacttggggaatttcttt
gctaatgctgatgccaactaccatcccaacaattcagacactaacatagttgatgttgat
cccatggacatgtcagatagtatgcaagaggccatgcatcgttcgaatttggacacgaga
ggtgcacagaacgcaagaaaagaagttccccttcatgttgtgccagccttgtctattatc
aaccttgagtcgccattatcatcatacgcagatctgcaacatgtactatttgaagaggag
cgaagtgcatatactcaagccatctcacaaaatacgagggatgggaaaattcatcctctg
acttttatacaccacacttctacttatcaggcttccttgtgcaagtttattgaatactgt
ttaagtcctgctataagtacgcttcaagatcgactgcgagataatcaaattcggctatca
gttctgagtgaagaagccaaaagtctggaggctgagtcatatagagggagcgaagcaggt
actggatctcctcgtcaagttgcatctcctacacaccgaggaggttcctctcctggtctg
agaaacttgcacggttcacctgaaccatccggttctaggaaggtagcaagtcctggtagc
cggagcagaaaaggatattga
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