Vigna umbellata (ricebean): 124834747
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Entry
124834747 CDS
T09662
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124834747
09123 Folding, sorting and degradation
03018 RNA degradation
124834747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124834747
03041 Spliceosome [BR:
vum03041
]
124834747
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124834747
mRNA degradation factors
5'-3' decay
Lsm complex
124834747
Spliceosome [BR:
vum03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124834747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF7452
Ntox4
Motif
Other DBs
NCBI-GeneID:
124834747
NCBI-ProteinID:
XP_047165477
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGR
RITKLDQILLNGNNIAILVPGGSPESE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatccgtcacagcttctcccatctgagttgattgatcggtgtataggatcg
aaaatttgggtgataatgaagggtgacaaggagcttgttggtactcttagaggctttgat
gtttatgtcaacatggtacttgaagatgttactgaatacgagatcacgtctgaagggaga
cggataaccaagcttgatcagattttactcaatggaaacaacattgccatattggtccct
ggtggttcacctgagtctgaatga
DBGET
integrated database retrieval system