Vigna umbellata (ricebean): 124834959
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Entry
124834959 CDS
T09662
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124834959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124834959
03036 Chromosome and associated proteins [BR:
vum03036
]
124834959
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124834959
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124834959
PBAF complex
124834959
GBAF(ncBAF) complex
124834959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Tox-GHH
Motif
Other DBs
NCBI-GeneID:
124834959
NCBI-ProteinID:
XP_047165754
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MATTATSAPSAPSSAAEPSPSSAETPPAPIPPKQPPPPPQPALAAVKPEAPLSDPKSSAD
ANVIVVPSYSRWFSWDSIHESEVRHLPEFFESASKSPRVYKYYRNSIVKFFRYNPTRKIT
FTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSSLAKPLKWDDKETKTDSASNHTESSS
APAKQNTKRLCSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVSSAEFRRVEISEET
KTDWSEKETTNLLEAITHYGDDWKRVSQHVAGRTEKECVAHFLKLPFSDRFQSYELQPAV
NGTDDSSNQLKRVTNADTESDLDNVASAESSKRMRLTPIADASNPIMAQAAFLSALAGSE
VAQAAAQAALTTLSEVYKATRINYRSFSRSTLLQDASVPFNGSNTSDSFQGSRLHAHIQL
EKEELDVEKGISAIIEVQMKSIQDKLVHFEDLDLLMEKERQQLEQMKNMFFLDQLTLLFN
KPSAPKAGECQEGNSVKTNHV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgccacctctgccccctccgccccctcctctgctgccgaaccttcacct
tcttctgcggaaacccccccggccccaattcccccgaagcaaccaccgcctcccccgcag
cctgcgttggcagcggtgaagccggaggcgccattgtccgacccgaaatcttccgcggac
gcgaacgtaatcgtggtcccgagctactctcgatggttctcgtgggactcgattcacgaa
agcgaggtgcgtcacctacccgagttcttcgaatcggcttccaaaagccctagggtttac
aagtactacaggaattctatcgtcaagttcttcaggtacaatcccacccgaaaaatcacc
ttcacggatgtccgcaaaactctcgtcggagacgtcggttcgatccgcagagtcttcgat
tttcttgaagcttggggccttatcaattaccacccgtcttcgtcgctggccaaacccttg
aagtgggacgacaaagagaccaaaaccgattctgcgtccaaccacaccgaatcttcttcc
gctcccgctaaacaaaacacgaagagactctgcagtggctgcaaagccgtttgtaccatt
gcttgttttgcttgtgacaagtatgatttgactctttgtgcgaggtgttatgttcgtggc
aattatcgagttggtgtgagctctgcggagtttaggcgagtggagataagcgaggagaca
aagacggattggagcgaaaaggagacaacaaatcttctggaagctattacgcattatggt
gatgattggaagagggtatctcagcatgttgctggcagaactgagaaggagtgtgttgct
cattttttgaagcttcctttttctgatcgattccagagttatgaactacaacctgctgtc
aatggcactgatgacagttctaatcagttaaagagggtaactaatgctgatactgaatct
gatttggataatgttgcctcagctgaatctagtaagagaatgcgtctcacgcctattgca
gatgcaagcaatcctattatggctcaggctgctttcctgtctgctttggccgggtcagag
gttgcacaggctgctgctcaagctgcattgacaactctgtctgaggtttacaaagcaact
agaataaattatcggtcattttcaaggagtacattgctgcaagatgccagtgtcccattt
aatggtagcaatacttcagattcattccaaggatctcgattgcatgcacatatacagctt
gagaaggaagagttagatgtggaaaaaggaatttctgcaattatagaagttcagatgaaa
agtatccaagacaagcttgtccattttgaagatttagacctgctgatggaaaaagaaagg
cagcagctggagcaaatgaaaaatatgtttttccttgatcaactcactcttttatttaat
aaaccatctgctccaaaagccggagaatgccaagaaggaaatagtgtaaagacgaaccat
gtttaa
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