KEGG   Vigna umbellata (ricebean): 124835015
Entry
124835015         CDS       T09662                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03420  Nucleotide excision repair
vum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124835015
  09124 Replication and repair
   03420 Nucleotide excision repair
    124835015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vum04121]
    124835015
   03400 DNA repair and recombination proteins [BR:vum03400]
    124835015
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vum04147]
    124835015
Ubiquitin system [BR:vum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     124835015
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124835015
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124835015
Exosome [BR:vum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124835015
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 124835015
NCBI-ProteinID: XP_047165819
LinkDB
Position
Unknown
AA seq 787 aa
MSLPTKRSGTAGSSPSPPPPMKKAKSLLLRAPSDDAVLDSSSMPLDDDLPNARAANLSRK
KATPPQPAKKLLIKLHKAKPTLPTNFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVND
LCLYKMGGNLYQRIEKECESHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGI
ALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERKGEAVDRT
LLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEIRLQEEHE
RCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFAMLMDGNRIEDLQRMYSLFLRVNAL
ESLRQAISSYIRRTGQGIVLDEEKDKDMVSSLLEFKASLDTTWEESFSKNEAFCNTIKDS
FEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFY
KKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQ
ARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNS
LGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTGIEDKELRRTLQSLA
CGKVRVLQKLPKGRDVEDDDSFVFNDIFTAPLYRIKVNAIQLKETVEENTSTTERVFQDR
QYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNP
QIYNYLA
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacggtcgggcaccgctggttcctccccgtcgccgccaccccct
atgaaaaaggccaagtcgctcctcctacgcgccccctccgacgacgccgttttggactct
tcctccatgcctctcgacgacgatctccccaatgcccgcgccgccaatctttcccgcaag
aaagccaccccgccccaacccgccaagaagctcctcatcaagctccacaaagctaagcca
acactgcccacaaattttgaggaggatacatgggcaaaactaaagtctgccatttgtgct
atatttttgaagcaacctaactcctgtgacttggagaagctttatcaggctgtgaatgat
ctctgcctttataaaatgggtggaaatctttatcaacgaatagagaaggagtgtgaatca
catatatctgcagcgttgcagtctttggttggccagagcccagatttagttgttttcctc
tctttagttgagagatgttggcaggatctttgtgatcaaatgttgatgattcgtggtata
gccttgtatctggacaggacctatgtgaaacaaacggcaaatgtacggtcattatgggac
atgggcttacaacttttccgcaaacatctttcattgtctcctgaagtagaacacaaaact
gttactggtcttcttcgaatgattgaaagtgaaagaaaaggtgaagcggtggatagaacc
cttctaaaccatcttttgaagatgtttactgctctgggaatttatgcggaaagctttgag
aagccattccttgaatgcacatctgaattttatgctgctgaaggtgtgaaatacatgcag
caatcagatgttccagattatttgaagcatgtggagataagattgcaagaagagcatgaa
agatgcttgatctacttggatgcaagtactaggaagccattgatagcaacagcagaaaaa
caacttcttgaacgtcatatacctgccatccttgataagggctttgcaatgcttatggat
gggaatcgtatcgaagaccttcagagaatgtattcactctttttaagggtcaatgccctt
gagtcattgaggcaggcaattagttcatacatcaggagaactggtcagggcattgttttg
gatgaggagaaggataaagatatggtttcatcccttttggaatttaaggcttctcttgac
acaacatgggaagaaagcttttccaagaatgaagcattctgtaacaccatcaaagattca
tttgagcacctcatcaatcttcgtcagaaccggcctgcagagttgattgccaagtttttg
gatgaaaaacttcgtgcaggtaacaagggaacttcagaagaagagttagagggcacactt
gataaagtcctggttttattcaggttcatacagggcaaggatgtgtttgaggcattttat
aagaaagatcttgctaaaagactactgttaggaaagagtgcttctattgatgctgagaaa
tctatgatctccaagttgaagaccgagtgtggcagccagttcactaacaaactagaaggg
atgtttaaggacattgaattgtctaaagaaataaatgagtccttcaaacagtcatctcag
gctaggacaaaactcccatcagggattgaaatgagtgttcatgtcttgacaactgggtac
tggccaacatatccacccatggatgttagacttcctcatgaattgaacgtttaccaggat
attttcaaagaattctatctaagcaagtacagtggaaggcgtctgatgtggcaaaattca
ttaggtcactgtgtattaaaggctgagtttcctaaagggaaaaaggagctggctgtctcc
ctatttcagactgttgtgctgatgttattcaatgatgctgagaaactaagttttcaagat
atcaaggactctactggtattgaggacaaagaactgagaaggactctgcaatcacttgcc
tgtggaaaagttcgtgtcctacaaaagttgccaaagggtagagatgtggaggatgatgac
tcatttgtttttaatgacatatttacagctcctctgtaccgtataaaggtgaatgcaatt
cagttgaaggagacagtcgaggagaacacaagcaccactgaaagagttttccaagaccgt
cagtatcaggttgatgctgctattgtgaggataatgaagactaggaaagtgcttagtcat
acccttcttattaccgaactcttccaacagctgaaatttccaataaaaccagcggacttg
aagaaaaggatcgaaagcctgattgacagggagtatcttgagagggacaagaacaaccct
caaatatacaattatctggcatag

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