Vigna umbellata (ricebean): 124835453
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Entry
124835453 CDS
T09662
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03030
DNA replication
vum03410
Base excision repair
vum03420
Nucleotide excision repair
vum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124835453
03410 Base excision repair
124835453
03420 Nucleotide excision repair
124835453
03430 Mismatch repair
124835453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124835453
03036 Chromosome and associated proteins [BR:
vum03036
]
124835453
03400 DNA repair and recombination proteins [BR:
vum03400
]
124835453
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124835453
DNA Replication Termination Factors
ELG1-RFC complex
124835453
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124835453
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124835453
Check point factors
HRAD17(Rad24)-RFC complex
124835453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
Rad17
RuvB_N
Mg_chelatase
AAA_24
DUF3802
AAA_5
AAA_11
AAA_14
DEAD
ResIII
SLFN-g3_helicase
ADK
AAA_assoc_2
AAA_2
nSTAND3
AAA_18
AAA_28
AAA_30
Effector_1
AAA_19
PhoH
RNA_helicase
AAA_7
TIP49
AAA_25
AAA_17
DUF3853
Gp44_lid
ATPase_2
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
124835453
NCBI-ProteinID:
XP_047166331
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MQSSQQWVEKYRPRQVKDVAYQEEVVRVLTNTLETGCCPHMLFYGPPGTGKTTTALAIAR
QLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTVKRKNGYLCPPFKIIVLDEA
DSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRIL
YICKEEGLCLDAKALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPEKV
VEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLG
EADKCLVDGADEYLQLLDVVSNTMKAFSNMPEEFAYEC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctctcagcaatgggtcgagaaataccgaccaaggcaagtgaaagatgttgcc
taccaagaggaagttgttcgagttctaacaaatacacttgaaactggatgttgcccccac
atgctcttctatggtcctcccggcactggaaaaacaactactgcccttgcaattgcccgt
cagcttttcgggcctgagctctataagtctagggtgctggagctgaatgcaagtgatgat
agagggattaatgttgttcgtacaaagataaaagattttgctgctgtggctgttggtact
gttaagcgtaagaatggttatctttgtccaccattcaagattattgttctagatgaggct
gattcaatgacagaagatgctcagaatgccctgaggcgtacaatggaaacgtactctaaa
gttacaaggttcttttttatatgcaactatgtgagcaggattatagaaccacttgcttca
cggtgtgcaaaattcaggttcaagccattgtcagaagaaatcatgagcagccggatattg
tacatatgcaaagaagagggcctctgtcttgatgctaaggctctttcaacccttagttct
atttctcatggagatcttcgccgggcaatcacatacttgcagtctgcagctcgcttattt
ggatcttcaatttcttcagagaatctgatttctgtgtctggggttgttccagaaaaagtt
gtggaggcagttcttcaagcttgcagaagtggtaattttgatttcgcaaacaaggaagtc
aacaatttcattgcagagggatatccagcttctcaaatgcttactcagttatttgaagcc
attgttgaagaaaatgatctgtcagatgaacagaaagcaagaatatccaagaagctgggt
gaagctgataagtgtctagttgatggtgctgatgaatacttgcaacttcttgatgtggtc
agcaatacaatgaaggcttttagcaacatgccagaagaatttgcttacgagtgttag
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integrated database retrieval system
