Vigna umbellata (ricebean): 124835454
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Entry
124835454 CDS
T09662
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03030
DNA replication
vum03410
Base excision repair
vum03420
Nucleotide excision repair
vum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124835454
03410 Base excision repair
124835454
03420 Nucleotide excision repair
124835454
03430 Mismatch repair
124835454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124835454
03036 Chromosome and associated proteins [BR:
vum03036
]
124835454
03400 DNA repair and recombination proteins [BR:
vum03400
]
124835454
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124835454
DNA Replication Termination Factors
ELG1-RFC complex
124835454
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124835454
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124835454
Check point factors
HRAD17(Rad24)-RFC complex
124835454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
AAA_22
Rad17
AAA_16
RuvB_N
Mg_chelatase
AAA_24
AAA_5
DEAD
AAA_14
AAA_11
ResIII
SLFN-g3_helicase
AAA_2
AAA_28
AAA_30
nSTAND3
PhoH
AAA_19
AAA_18
RNA_helicase
AAA_7
TIP49
AAA_25
DUF3802
ATPase_2
MCM
NPHP3_N
AAA_3
IstB_IS21
AAA_17
bpMoxR
Motif
Other DBs
NCBI-GeneID:
124835454
NCBI-ProteinID:
XP_047166332
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MQSSQQWVEKYRPRQVKDVAYQEEVVRVLTNTLETGCCPHMLFYGPPGTGKTTTALAIAR
QLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTVKRKNGYLCPPFKIIVLDEA
DSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRIL
YICKEEGLCLDAKVRTLWTI
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctctcagcaatgggtcgagaaataccgaccaaggcaagtgaaagatgttgcc
taccaagaggaagttgttcgagttctaacaaatacacttgaaactggatgttgcccccac
atgctcttctatggtcctcccggcactggaaaaacaactactgcccttgcaattgcccgt
cagcttttcgggcctgagctctataagtctagggtgctggagctgaatgcaagtgatgat
agagggattaatgttgttcgtacaaagataaaagattttgctgctgtggctgttggtact
gttaagcgtaagaatggttatctttgtccaccattcaagattattgttctagatgaggct
gattcaatgacagaagatgctcagaatgccctgaggcgtacaatggaaacgtactctaaa
gttacaaggttcttttttatatgcaactatgtgagcaggattatagaaccacttgcttca
cggtgtgcaaaattcaggttcaagccattgtcagaagaaatcatgagcagccggatattg
tacatatgcaaagaagagggcctctgtcttgatgctaaggtgagaaccttatggactatt
tag
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integrated database retrieval system
