Vigna umbellata (ricebean): 124835487
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Entry
124835487 CDS
T09662
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124835487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124835487
03009 Ribosome biogenesis [BR:
vum03009
]
124835487
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124835487
Spliceosome [BR:
vum03041
]
Complex A
U1 snRNP components
U1 related factors
124835487
Complex B
124835487
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
Pre-60S particles
Helicases
124835487
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124835487
NCBI-ProteinID:
XP_047166371
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MAATATASSMGPRYAPPDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPPKS
SSVPSSSVQVQHTSQGSQRGRSPDFSDRYDRNGSGGSNDASRNNQSSKGGSYSSHSVPTG
TNAAANVSYSVKGHGASDAAAVLSPESYRSRHEITVTGDNVPPPLASFGSSGFPPEVLRE
VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFVHLKRCGNNSKMGPT
ALVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLN
DILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKI
AADLLVKPVQVNIGNVDELVANKSITQHVEVLPLMEKQRRLEHILRSQDQGSKIIIFCST
KKMCDQLARTLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR
VVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYATDLIKVLEGANQKVPPEL
RDMSSRGGSGMGRSRRWGSGGRGGRSDSGYGGRNNDSGYGGRGGDSNYGARGNASSGRGG
RGFDYDSQRNDRGLSPDKGSKWSDRYKSVNRERSRSPDRAALPQHSQSSSFHKAMMERGG
WGDSERNKSSNRDRSRSPSPYRQERTTAVRERSPVHSFHRSMMGQSQSSPPRQRARSPYR
NSSPSQGGGRSYNSPPKEWGGNGGEVEEGMIPEEDGMIGQGGD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacagcaactgcctcttcaatgggtccgcggtatgcaccaccagatccgaca
ctccctaaaccatggaagggtcttgtggatggcaagaccgggtatctttacttttggaat
cccgagaccaatgtcacccagtatgagaggccatcgagctcagctgccccaccaaagtcc
tcttcagtgcctagctcttctgtccaggttcaacatacgtctcaagggtcgcaacgtggt
cgtagtcctgatttcagtgataggtatgatagaaatggcagtggtgggtcaaatgatgct
tcacggaataatcagagttccaaaggtggaagttacagttctcatagtgtgccaactgga
acaaatgctgctgccaatgttagttattctgtcaaaggtcatggggcatcggatgctgca
gctgtgctatctcctgagtcttatcgaagtcggcatgaaataactgtgactggagacaat
gtgccaccgcctcttgcttcatttggttctagtggctttccaccggaggtgctgagagag
gtacaaaatgctggtttctcagccccaactccaattcaggcacagtcatggcccattgct
cttcaaagtagagatatagttgccattgcaaaaacaggctcagggaaaacattgggatat
ttaattccagcatttgttcacctcaagcgctgtggtaataactccaaaatgggccccact
gcattggtactttcaccaacaagggagttggcgacacaaatacaagatgaggctgtgaag
tttgggaaatcttcaagaatttcttgtgcatgtttgtatggaggagcacccaagggtcct
caactcagagacattgaccggggagcagatattgtggtagccactcctggtcgcttgaat
gatattcttgagatgagaagaattagtcttcatcaggtctcttacctggtgctagatgag
gcagaccggatgctggatatgggtttcgaacctcaaattaggaaaattgttaatgaggtg
cctaatcgcaggcaaacactcatgtttactgcaacttggccaaaggaggttaggaaaatt
gcagctgatctactggtcaaacctgtccaggtgaacattggcaatgtggacgagcttgtt
gctaacaagtcaattactcagcatgttgaagtgttgcccctgatggagaaacagagacgt
ctggaacatattttacggtcacaggatcaaggatcaaagataatcatattctgttctacc
aagaaaatgtgtgatcaacttgctcgtactctgacacgtcagttcggagctgctgctata
catggggataaatcccaggctgagagggatcacgtgttgagtcagtttcgaactgggagg
tcacctgttcttgtggctacagatgttgctgcccggggactggatatcaaggacattagg
gtggttgtcaattacgacttccccacaggagttgaagactatgttcataggattggaagg
actggaagggctggagccactgggctagcttacactttctttggtgaccaggatgcaaaa
tatgctaccgatctcatcaaagttttggaaggtgcaaatcagaaagtacctccagaactt
cgggatatgtcatcgcggggtggtagtgggatgggaagatccagacgatggggttctggt
ggaagaggtggacgcagtgattctggatatggtggaaggaataatgactcaggatatggt
ggaaggggtggtgattcaaattatggagctaggggaaatgcttcttctgggagaggaggc
cgtggttttgactatgattctcagaggaatgatcggggtctgagtccagacaagggatct
aaatggagtgatcgctacaaaagcgtcaaccgtgaacgtagtcgtagccctgacagggct
gcactacctcaacattcccaaagcagcagttttcacaaggcaatgatggaacgtggtgga
tggggtgatagtgaacgcaataagagctctaacagagatagaagccgcagtcctagcccc
tacagacaggaaaggaccacagcagttcgtgaacgatccccagttcacagttttcatcga
tcgatgatgggacaaagtcaatcatccccaccacggcagcgtgcacgcagtccttatcga
aactcatcaccctcccagggcggtggtaggtcttataatagtcctccaaaagagtgggga
ggcaatggaggagaggtggaggaagggatgattccagaggaagatggaatgataggtcaa
ggtggggattag
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integrated database retrieval system
