Vigna umbellata (ricebean): 124835535
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Entry
124835535 CDS
T09662
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124835535
04121 Ubiquitin system [BR:
vum04121
]
124835535
Enzymes [BR:
vum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124835535
Membrane trafficking [BR:
vum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124835535
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124835535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
Anti-TRAP
HypA
zf-Nse
zf-C2H2_DHX34
Motif
Other DBs
NCBI-GeneID:
124835535
NCBI-ProteinID:
XP_047166428
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSSAGGDGTSGEPRQYFCHQCNRTVSVTPSPSSDLLCPNCNGGFLEELEIPNPNPIPIPS
NPFFPDFPLAGTTAIPLIFPGGAGQPFDDFSTLSGTRSDAATADTALAPFVLLQNYLQTL
RAAGGGGNLQLVIESGDPGGAFRFPGITHGDYFFGTGLEELIQHLAENDPNRYGTPPASK
KAVEGLPDVSVTDELLASDSSQCAVCKDTFELGETAKQMPCKHIYHADCILPWLELHNSC
PVCRYELPTDDPDYEQRAHRGSGGGSGGGSGGTGSGVAPQVNWNLAVGPGGSADTSGGGD
NSQRRRFRVALPWPFRQSVSSGAETSNVGGANNDDNSINGGETNSGQSNSENRGNRNFES
ETRQEDLD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgccggcggcgacggtacctccggcgagcctcgccaatacttctgtcaccag
tgcaatcgcaccgtttctgttaccccttccccgtcctctgatcttctctgccccaattgc
aacggcggcttcctcgaagaactcgaaatccctaaccctaaccctatccctatcccgtcc
aatcctttcttccccgacttccccctcgctgggaccaccgccattcctctcatcttccct
ggaggagctggccagcccttcgacgatttctccaccctctccggcactcgatctgacgcc
gccaccgccgatactgccctcgccccctttgtcctcctccagaactacttgcaaacccta
agagccgctggcggcggtggaaaccttcaactggtgattgagtccggcgaccccggcgga
gcgtttcggtttcctggcatcacccacggtgactacttcttcgggacgggccttgaggag
ctgatccagcaccttgccgagaacgatccgaaccgctatggtaccccaccggcttctaag
aaggcggtggaggggctgccggacgtctcggtcaccgacgagctgcttgcgtcggattcc
tcgcaatgtgcagtgtgcaaagacacgttcgaactcggtgaaaccgcgaagcagatgccc
tgtaagcatatatatcacgcggactgcattttaccttggttagaattgcataattcctgt
cccgtttgtcggtatgagctgcccacagatgatcctgattacgagcagagggctcatcgt
ggtagcggtggcggtagtggaggcggtagtggtggtaccggcagtggggtggctccccag
gtgaattggaacctggctgtggggcctggtggttctgcggatacatctggtggaggagac
aattcccagcggaggaggtttagggtggctttgccgtggcccttcaggcaatctgtttct
tctggtgctgagacaagtaatgttggcggtgccaacaatgatgacaacagtataaatggt
ggggaaaccaatagtgggcaatcaaattctgaaaacaggggaaatcggaactttgagtcg
gagaccagacaggaagatctagattga
DBGET
integrated database retrieval system
