Vigna umbellata (ricebean): 124835606
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Entry
124835606 CDS
T09662
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00730
Thiamine metabolism
vum01100
Metabolic pathways
vum01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
124835606
Enzymes [BR:
vum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
124835606
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
124835606
NCBI-ProteinID:
XP_047166528
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MASVHANVTPLVCKNGNHASQSKFPSSTFLPGFDVVGRVSSAWKKELVPPSMTLVPRATL
TFDPPTTNSDKTNQKKHTIDPASPDFLPLPSFEQCFPKSTKEHREVTHEETGHVLKIPFR
RVHLSGEEGHFDTYDTSGPQNINPRIGLPKLRQEWVDRRQKIGPPRFTQMYYAKQGIITE
EMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVAS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSSVPVGTVPIYQALEKVNGIA
ENLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKCHPHAQAWDDALSKARFEF
RWMDQFALSLDPMTAMAFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEKYGYG
TAEEALQRGMDAMSAEFQAAKKTISGEQHGEAGGEIYLPEAYVNSKERTE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgcatgctaatgtgacaccacttgtttgcaagaatggcaaccatgcttct
caatcgaaatttccaagttctacattcttgcctggatttgatgttgttggacgtgtttca
agtgcttggaagaaggaacttgttccaccttccatgaccttggtacctagagccacatta
acatttgatcctccaactaccaattcagacaaaaccaatcaaaagaagcacactattgac
cctgcttctcctgattttcttccccttccttcctttgaacagtgctttccaaagagcact
aaagaacacagggaagtgactcatgaagaaactggtcatgtgctcaaaattccctttcgt
agagttcacctctctggggaggaaggacactttgatacctatgacactagtggtccccaa
aatataaaccccaggataggactcccaaaattgcgtcaagagtgggttgacaggaggcag
aaaataggtccaccaagatttactcagatgtactatgccaagcagggaattatcactgag
gagatgctttattgtgccgctcgtgagaagcttgacccagagtttgtgaggtcagaagtt
gctcgtggacgtgctatcattccttccaacaaaaaacacttggagttagagcccatgatt
gttggaagaaactttttggtgaaagtaaatgccaatattggaaattctgcagttgctagc
tccatagaagaggaggtttacaaggttcagtgggcaactatgtggggagctgatacagtc
atggatctctcaactggtcgccacatccacgaaactcgagagtggatcttacgcaactcc
tctgtaccagttggaactgtacctatttatcaagcacttgaaaaagttaatggaattgct
gaaaatcttacctgggaggttttcagggacaccctgattgaacaagctgaacagggtgta
gattacttcaccatccatgcaggagttcttctgagatatattccattaacagcaaaacgc
atgacaggaattgtctccaggggaggatctattcatgctaagtggtgcttagcttatcac
aaagagaattttgcttatgagcactgggatgacattcttgacatctgcaatcagtatgat
gtggccctatccattggtgatggtctaagacctggatccatctacgatgcaaatgacacg
gctcaatttgctgaactcttgacccaaggagaactgacccgtagagcatgggaaaaggat
gtgcaggtgatgaatgaaggacctggacatatcccaatgcacaagattcctgaaaacatg
cagaaacagttagaatggtgtaatgaagcacctttttacacccttggtcctttaacaact
gatattgctcctggctatgatcacattacctctgcaatcggtgctgcaaatattggtgca
cttggtacagctcttctctgttatgtgactccaaaagaacaccttgggttgccaaaccgg
gatgatgttaaggctggagtgatagcttataagatagcagctcatgcagctgatttagcc
aaatgtcacccacatgctcaggcctgggatgatgcgttaagcaaggcaagatttgaattt
cgatggatggaccagtttgctttgtcattggatccaatgacagccatggccttccatgat
gaaaccttgccatcagatggtgcgaaagtggcacatttctgttcaatgtgtggccctaaa
ttttgctctatgaagataacagaagatgtgagaaagtatgctgagaaatatggctatgga
actgctgaggaagctttgcagcgtgggatggatgctatgagtgctgaatttcaagctgcc
aagaaaactatcagtggggagcaacatggtgaagctggtggagagatttacttgccagaa
gcttacgtaaactccaaggagaggactgaatga
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