Vigna umbellata (ricebean): 124835755
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Entry
124835755 CDS
T09662
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124835755
03036 Chromosome and associated proteins [BR:
vum03036
]
124835755
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124835755
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124835755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HHH_9
HTH_44
Tex_central_region
LZ_Tnp_IS66
Tex_N
DUF4691
Motif
Other DBs
NCBI-GeneID:
124835755
NCBI-ProteinID:
XP_047166736
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MGRERRENHRDQEQEKIQRKGKSSEPDPDYEEDEEDLDAFDTDGFIVDDPEYEEDGEEES
RKQAQKKKKRKSLGTIVLDDEDLELIRENRRINQEASRDGKLKRLRKAGVDSALMEYSSN
DGGSLFDNIAEADMADFIVDEDVVILKKPDFLREQKLKGIKHSPSLSKGAKLSFGKEGRL
EKHIENDQIQSVDPNKYKSFIPADTYVPGEDHDIDIPERMQIIQDIVGSPIDGMSLEEES
SWILGQLASNINPLFSEANSCRLVDTAKRGDIISFLELHHKMKYDIPFIAMYRKEQCLSL
LEDPKLNDESENISLKMHKMLWIIQELDKKWWLLQKRKNLLMEYYNKHFEEKLQLSFLVE
ESSFHAQMFDSITNMLKIAETETEIDDIDRRFNLYFPPVEEPFDCGFRRPMTKSYYSNCY
KAGLGSLSSKFGDPEKFSSLVTLSQVGTNKEEDSEESPEQIASIYKCETFQTSEAVLKGA
RHMAAVMLSSEIPFRKYVRTIFMDKALVSTNPTLEGNIAIDSFHEFAGVKWLRDKPLPKF
EDSQWLLIQKAEEEKLLQVKIHLPDHTINELTMTCNDSYLKDSEGISTRLWNEQRKLILK
DVISNFILPSMEKEARVLLNAKAKNYVLMKYAMQLWNRVSVAPYLKDVSDTVQQKGVMAC
CWGNGKPGTTFVMLDSGGELVDVMHARSLTLRSQQIIDQQSRKNDQQCILRFLTTYQPDV
IVIGASNASCLKLREDINEIISMISEHNFRNFNQGTNVLPTVVLGETVLPRLYEDSEIST
RQLPRQDGIVRRAVALGRYLLNPLAMVATLCGEENEIVCWKVTPLEKFLTSDEKLKMIEW
VMTDVTNQVGIDINLAVRHEWLLASLQFVSGLGPKKANILCRQLLGGADVRNRRDFAKFG
LNTNKIFCNAVGFLRVSCDVADNTLDRTRIHPESYNLSEELARAVYRKLVQENPEADVSE
ESAIECIQNDPNLLKKFDLNEYADRLEIENGENRRVTLFDIKMELLHGFKDPRRPYTEPT
EDEEFCMITGETGDVLVEGKRVEATVRKVLPKQAFCVLHSGMAAVLFKDDFSDGTENISL
TEKLREGVVLACKIKLVDKSRCQVNLTCKVSELKNDGDQSFHDMDPYYHEGKTISINQLE
GTEEVELGNKHFLPRMISHPNFQNINADQAKQFLADHEVGEYIFHPSSRGLYYLTLSLKI
CNSVYVHKDIVEGGKGNKLKNLAELGETLKIGEETFENINQVIELYVNPLVVLLKAMLNF
RKFKNGTKVEVDERLKHEKDEYPNRIVYGFGVSYEHPGTFILSYIRSTNPHHEFVAIHPK
GFKFRKQIFENIELLVAYFQNHINDNVALAKSSIKVGSVSDSLSGGWRNSVGQHSESKAY
NDHRGGRGPQRGRRGRGRGFGPRSGSRDDSADDSFAGKSWEVRGSGEGDGGRQGRGRGRG
RGRGGRGSQGDTNDGGFEPGQNEGRERGRGRGRGRGRRGSQGSDDQGRGGWGRNNHGSRN
RADGDYSDAYKGGDWGQGSDQGRGWRGSQGNDQGCSDWGEGPDQGRGWRGSQGNGQGCSG
WGGNNSNEERNEGNKDWGQGNGGSGSENKGWGKNASPSGGGGGWGWTG
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggagagaagagagaaccatcgcgaccaagaacaagagaaaatccaaaggaaa
ggaaaaagttcagaacctgatcctgattatgaagaagacgaggaagatttggatgctttt
gatactgatgggtttattgttgacgaccccgaatatgaagaagatggtgaagaagaaagt
cgaaaacaagcccaaaagaagaaaaagaggaaatcattgggaaccattgttcttgatgac
gaggatcttgagttgattcgcgaaaacaggcgcatcaatcaagaagcatcgagagatgga
aaattgaagagacttagaaaggctggtgtagactctgcactgatggaatactcttctaat
gacggaggatcactctttgataatattgctgaagctgacatggcagatttcatagtggat
gaagacgttgtcatcctcaagaagccagattttctcagagaacaaaagttgaaaggcata
aaacattcaccttcactttcaaaaggagccaaacttagttttggcaaggaaggtcggctg
gaaaagcacattgagaatgatcaaattcagtctgttgatcctaacaagtataaatcgttc
atccctgctgacacgtatgtacctggagaggatcatgatatagatatacctgagaggatg
cagataattcaggacattgtaggatctccaattgacggaatgagtctagaagaagaaagt
tcttggatactaggtcaactagcatctaacataaatccattatttagtgaggctaactcg
tgcagactagtcgatacagccaaaaggggagatattattagtttcttagaattacatcat
aaaatgaaatatgatattccttttattgcgatgtaccggaaggaacaatgccttagtctt
ctggaagatccaaaattgaatgatgaatcagaaaatatatcgctcaaaatgcacaagatg
ctctggataatccaagaattagataaaaagtggtggcttcttcagaagcggaagaacctg
ctcatggaatactataacaaacattttgaggaaaaacttcaactgtctttccttgttgaa
gaatccagttttcatgcgcagatgtttgattcaatcaccaatatgctaaaaattgctgaa
acagagactgagattgatgatatcgataggaggtttaatttgtatttccccccagtcgag
gagccttttgactgcggttttagaagacctatgacgaaatcatactattccaattgctat
aaggcaggtcttgggtcactttcaagcaaatttggcgatcctgagaaattcagttcttta
gttactctttctcaagtgggaacaaacaaagaagaagattcagaggaatctccagagcaa
atagcttcaatatacaagtgtgaaacctttcaaacttcagaagctgtacttaaaggggct
aggcacatggcagcagtgatgctaagcagtgagattcctttcaggaaatatgtccgcacc
atatttatggacaaggctttagtttcaactaaccctacactggaaggaaatatagctata
gattcctttcatgaatttgctggtgttaagtggttgagggacaaacctctcccgaagttt
gaggattcccagtggctattaattcagaaggctgaagaagagaagcttcttcaagttaaa
atacatttgcctgatcataccataaatgaattgacaatgacctgtaatgattcctatctc
aaagatagtgaagggatatctactagactttggaatgaacagcgtaaattaatcctgaag
gatgtcatttccaatttcattttgccttctatggagaaggaagcacgggtattgttaaat
gccaaggctaaaaactatgtattaatgaagtatgcaatgcaattatggaacagggtctct
gtggcaccgtatttgaaagatgtgagtgacactgtacagcagaagggagtaatggcttgc
tgttggggaaatggaaagccaggtacaacgtttgtcatgttggactctggaggagaattg
gttgatgtgatgcatgctcggtcgcttacactacgatctcaacaaatcattgaccagcag
agcaggaaaaatgatcaacagtgtatcctcaggttcctaacgacatatcaaccagacgtt
atcgtaataggagcaagtaatgcgtcttgtttgaagttgagggaggacattaacgagatt
atttccatgatctcagagcacaattttcgaaacttcaatcaaggaacgaacgtactacct
acagttgtattaggggagacagtcttgcctcgtctttacgaagattcagaaatttccacg
aggcagcttcctagacaagacggcattgtcaggagagctgtggctcttggacgttacctt
ctaaacccactggctatggtggcaacactatgtggagaggaaaatgagattgtctgttgg
aaggtgacccccctggagaaattcctaacaagtgatgagaagttgaagatgattgaatgg
gtcatgacagatgttacaaatcaagtaggcatagacataaatttggcagtcagacatgag
tggctgttggcctctttgcagtttgtttctggtcttggacccaagaaagccaatattttg
tgtagacaattgcttggaggggccgatgtgagaaatagaagggattttgctaaatttggg
ctgaacacaaacaagattttttgcaatgctgttggctttttacgtgtttcttgcgatgta
gcagacaatactcttgaccgtaccagaattcatccagagtcgtacaatctttcagaggaa
ttagcaagggctgtttacaggaaacttgttcaggaaaatccagaagctgatgtttccgaa
gagagtgcaattgaatgcattcaaaatgatccaaacctgctaaaaaaatttgatttaaat
gaatatgctgatagattggaaatagaaaatggtgaaaacagaagggttaccctttttgac
ataaagatggaattactccacggttttaaagatcctaggaggccttatacggagccaact
gaagatgaggaattttgcatgataactggagaaactggggatgtgctagtagaaggaaaa
agagttgaggcaacagttcgtaaggtgcttcctaaacaagcattttgtgtcctacactcc
ggaatggctgcagtactttttaaggatgacttttcagatggaactgagaatatctcttta
acagaaaaattgcgtgaaggtgttgtgcttgcatgcaagatcaaattagttgataagagc
agatgccaggtaaatctgacttgtaaggtgagtgagttgaagaatgatggcgaccaaagt
ttccatgacatggatccttattaccatgaaggaaagaccatttcaatcaatcaattggag
ggaacagaagaggtggagcttggaaataaacatttcttgcccaggatgatttctcaccct
aattttcaaaatataaatgcagatcaagcaaaacagttccttgcagatcacgaagttggg
gaatatatctttcacccaagttcaaggggtctatattatttgaccctctctcttaaaatt
tgtaatagtgtttatgtacacaaagacatcgtggaaggtggaaagggtaataaattaaaa
aacttggcagaacttggagagacattaaaaataggagaggaaacatttgagaacataaat
caggttattgaactatatgtcaatccactagtagttcttctgaaagctatgcttaatttt
agaaaatttaagaatggcacaaaagttgaggttgatgaacggttaaagcatgagaaggac
gaatatccaaacaggatagtatatggctttggcgtttcgtatgaacatcctggcactttc
atcttgtcttacattagaagtacaaatccacatcatgagtttgtggctatccatccaaaa
ggattcaagttcaggaagcaaattttcgaaaacattgagctgctggtggcatattttcaa
aatcatatcaatgataatgttgcgctagcaaaatccagcataaaagttggttcagttagt
gattccttgtctggagggtggagaaacagtgtcggtcaacactctgaatcaaaagcttac
aatgatcatcggggtggtcgtggtcctcaacgtggccgtagaggccgtggacgagggttt
ggccctaggtctggctctcgtgatgatagtgccgatgattcctttgcaggcaagagttgg
gaagttaggggttctggcgaaggcgatggtgggagacaaggtaggggtaggggtaggggt
aggggaagaggaggtagaggaagccaaggtgatacaaatgatggtggttttgaacctggt
cagaatgaagggagagagagaggaagagggagaggacgggggagaggaaggaggggaagc
caaggtagtgatgaccaaggacgtggtggttggggtagaaataaccatgggagtaggaac
cgtgcagatggtgactacagtgatgcttacaagggtggtgattggggacaaggttctgat
cagggaagaggatggagaggaagtcaaggcaatgaccaaggatgtagtgattggggagaa
ggtcctgatcaaggaagaggatggagaggaagccaaggcaatggccaaggatgtagtggt
tggggtgggaataactcgaatgaagagaggaacgaaggcaacaaagattggggacaaggt
aatggtggatccggaagtgagaacaaaggatgggggaagaatgcaagtccttctggtggt
ggaggtggatggggatggacggggtaa
DBGET
integrated database retrieval system
