Vigna umbellata (ricebean): 124835775
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Entry
124835775 CDS
T09662
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124835775
03036 Chromosome and associated proteins [BR:
vum03036
]
124835775
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124835775
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124835775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HTH_44
SH2
HHH_3
Tex_N
OB_PDCD11
Motif
Other DBs
NCBI-GeneID:
124835775
NCBI-ProteinID:
XP_047166720
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MAKGVISDEEDDVELDEEEREPIDGEELEEGRDVNNEDEDEEEEGQDEYENDGFIVDDIE
DEEEQDEEERADSDDERQRKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKK
GRRDTEEEPSGLSDEEEFVGSGKVGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEED
ADIGEDDEMADFIVDEEEVDENGAPMRQRKLKKKKTRQAPGVSSSALQEAQELFGDPDEL
ILNRQKNLEMSEYRETRLEDEFEPIVLSEKYMTEQDDQIRELDIPERMQISDESTGAPPS
DRSSIEEESQWIVNQLGNGAVPWIYKKVPNSQNNEKDDLPINKDDINRFLELHHVQKLDI
PFIAMYRKEECLSLLKDLEQPEAVDENDKTPTLKWHKVLWALQDLDKKWLLLQKRKSALK
LYYNKRFEEESRRVYDETRLNLNSQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAG
VDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGFCLTDVNLQELEDPKETPEEMA
SNFTCAMYETPEEVLKCARHMAAVEISCEPSIRKHVRTHFLDHAVVSTCPTADGNTAIDS
FHQFSGVKWLREKPLSKFEDVQWLLIQKAEEEKLIQVTIKLPEEYLNKLIDQFNEYYISD
SVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWNKVSVG
PYQQKENDLGSDEEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTFRSQNVSD
QQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEMDG
LSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEILS
WKLSPLESFLNQDDKFAMVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAAS
LQRSLVRAGAIFTRKDFVTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHP
ESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYASGKNRQNK
IQTFYDIKRELIQGFQDWRNQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQAQKA
ICGLESGMTGILMKEDYTDDWRDVIELSDRLHEGDMLTCKIKSIQKNRYQVFLVCKDSEM
RSNRLQHNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEAME
FLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIIEGGKEHKDITSLLRIGKTLKI
GDDTFEDLDEVMDRYVDPLVAYLKTMLNYRKFRKGTKSEVDELLRIEKAEYPTRIVYSFG
ISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSA
PSIRSVAAMVPMRSPATGGSSGPSVGSGWGGGSNNEGGRRGHSYDRDRSSTPGSRTGRGE
YRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGHNSNNERQDSGYGGSRWGSNNPKDS
DDGLNSFPGAKVQNSPGREAFPGGWGGVSGGWGDRSGSANNNDNGVWGQEIGGGGGPSDG
DQGSSGWGSAPKKAAAGNGWGSGNSGW
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcgtaatctcagacgaagaagacgacgtcgagctcgacgaagaagagagg
gaacccattgacggggaagaattggaagaggggcgggatgtgaataacgaagatgaagac
gaagaagaggaagggcaagatgagtatgaaaatgatggatttattgtggatgacattgag
gacgaagaggagcaagatgaagaagagagagcagacagtgatgatgagcgacagaggaag
aaaaagaggaagaaaaaggaagagtatgtgcttgatgaagatgattatgagttgctggag
gacaacaatataaatattcatcgtcggaaggagagcaaaaagtttaagcgactgaaaaaa
ggccggagggatacggaagaggagccttctgggctgtctgatgaggaggagtttgttgga
agtggtaaagttgggcgaactgctgaggagaagcttaaacgcagtttatttggtgatgat
gaaggagctccacttgaagacattgctgaagaggaggaacaaggagaggaagaagaggat
gctgacattggagaagatgatgaaatggctgacttcattgtggatgaagaagaagttgat
gagaacggagctcctatgaggcagaggaagctgaagaagaagaaaactaggcaggctcca
ggagtttcttcctcagctcttcaagaagctcaagaattatttggtgatccagatgagttg
attctgaatcgccagaaaaatcttgaaatgagtgaatacagagagaccagacttgaagat
gaatttgagcctattgttctgtctgagaaatatatgacagagcaggatgaccaaattagg
gagcttgatattccagagagaatgcagatatcagatgaaagtactggtgccccaccatcg
gatagaagtagtatagaagaagagagtcaatggatagttaatcaacttggtaatggagct
gtcccttggatttacaagaaggtgccaaactcccaaaataatgaaaaggatgacctaccg
ataaacaaggatgatattaacagatttttggaattgcatcacgtgcaaaagttagatatc
ccttttattgctatgtatcggaaggaggaatgcttaagcctattaaaagacctggagcaa
cctgaagctgttgacgagaatgacaagacacctactctgaaatggcacaaggttctctgg
gctcttcaggacttggacaagaagtggttgcttcttcagaagaggaagagtgccctcaag
ttatattataataaacgatttgaagaggagtcgcgtcgtgtgtatgatgaaacgagacta
aacttgaatagtcaattgtttgagtcagtcatgagatcactgaaagaagcagagtccgag
agggaggttgatgatgttgactccaagttcaacttgcatttcccaccaggtgaagctggt
gttgatgaagggcaatacaagaggccaaaaaggaagtcaatgtatagcactttcagtaag
gcaggtctatgggaggttgcgagcaggttcgggtgtagtcctgagcaacttggattttgt
ctaactgatgttaacctacaagagttggaagatccaaaggaaacacctgaggagatggct
tctaacttcacgtgtgctatgtatgaaactcctgaagaagtacttaaatgtgccaggcac
atggcagctgttgagataagttgtgagcctagcattaggaaacatgttcgtacccacttt
cttgaccatgcggttgtgtcaacatgtcctactgctgatgggaatacagcaatagattct
ttccatcaattttctggggtgaagtggctgcgggagaagccattgtctaagtttgaagat
gtgcaatggctccttattcagaaggcagaagaggagaaactcattcaagttactattaag
ttgcctgaggagtatcttaataagttgatagaccaattcaatgaatattatattagtgac
agtgttagcagatctgctcaactgtggaacgaacagaggaagttgatactgcatgatgcc
atttttcgattccttttaccatcaatggaaaaagaggcaagaggtgtattggcaagtaaa
gcaaagaattggttacttatggagtatgggaaggcattatggaataaggtttctgttgga
ccttatcaacagaaggaaaatgatcttggctcagatgaggaggccgctccaagggttatg
gcatgctgttggggcccgggaaagccacaaacaacttttgtaatgttagattcatcggga
gaagtgttagatgtgctttacactgggtcccttacttttaggtcacagaatgttagtgac
caacaacggaagaagaatgaccaggagcgagtgttgaagtttatgacagatcaccaacca
catgttgttgttttaggagcagttaacttgtcttgcacccgtttgaaggaagatatatat
gaggttatttttaagatggttgaggaaaaccctagagatgtcgggcatgaaatggatggg
ctcagcattgtctatggagatgaatcacttccccgtctttatgaaaattctcgaatttcc
tctgaacaacttccttcacagcaaggtatagtgaggcgggctgttgcacttggtcgttat
ctccagaacccattggcaatggttgcaacattatgcggacctagaaaggaaatcttgtca
tggaaattgagccctttagagagttttctcaaccaagatgataaatttgctatggttgag
caggttatggtagatgtgaccaatcaggttggcttagacattaatttagcaataagtcat
gagtggttatttgcaccattacagtttatttctgggcttggtccaaggaaggctgcatcc
ttacagagatctttggtaagggctggtgccatttttacacggaaggactttgtcacagaa
cacaaacttggtaaaaaggtgtttgtcaatgcagttggtttcttgcgtgtccggcgaagt
gggttggcagctagcagcagccaatttattgatttactggatgatacaagaattcatcct
gaatcttatattcttgcacaagagttggccaaagatgtatatgaagaagatggtacaggt
gatgcaaatgatgatgatgatgcactggagatggccatagagcacgtgagagatcgacct
agttatttgaaaaaccttgatgttgaggaatatgcttctggaaaaaatcggcagaacaaa
atacaaactttctatgacataaaaagagaattaattcaaggttttcaggattggcgcaat
caatatgaagaaccaagtcaggatgaagaattctatatgatttcaggtgagactgaagag
acgcttgctgaaggcaaaattgtccaagtcacagttcgaagagtacaggctcagaaagca
atatgtgggcttgaatctggaatgactggaattctcatgaaggaagactacacagatgac
tggagagatgtaattgaattatctgataggctacatgaaggtgacatgctcacttgtaaa
atcaagtcaattcaaaagaataggtatcaagtcttccttgtttgtaaggacagtgaaatg
agaagtaaccgcttacagcataaccgtgatattgacccctattaccatgaagatcggagc
tgctttcagagtgatcaagacaaagctcggaaagaaaaggaacttgctaagaagcatttc
aagccaaggatgattgttcatccacgctttcagaacataactgcagatgaagcaatggag
ttcttgtctgacaaagatcctggagaaagtattatccgtcctagttcacgaggaccttca
tatcttactttaactcttaaaattaatgatggagtatatgcccataaggatataatcgaa
ggtgggaaggaacacaaggacattacaagcttactgcgaattgggaagacactaaaaatt
ggagacgacacttttgaggacttagatgaggttatggaccgatatgtagatccattggtg
gcttacttaaagacaatgctaaactatcgcaaatttcgaaaaggtacaaaatcagaagtt
gatgaacttttgaggattgagaaagctgagtatcctacgcgcattgtctatagttttggc
atctcccacgagcatcctggcacatttatattaacttatataagaagtacaaatccacac
cacgagtacattgggctttacccaaaaggatttaggttcaggaaaaagatgtttgaggac
atcgatcggcttgtggcatactttcagaggcatattgatgacccccaacacgattcagcc
ccctccattagatcggttgctgctatggtaccaatgcgtagccctgcaactggtggctcg
tctgggccatctgtgggcagtggctggggtggtggttcaaacaatgagggtggtaggaga
ggtcactcttatgatagggatcgatcttctactcctggttccaggacaggacgtggtgag
tatagaaacaatgggaatcaggacgaacatccaagtggggtgccccgtccatatggtggt
ggtcgagggcgtggtcgcggtcgcggttcttataacaacagaggacacaattccaacaat
gaaaggcaggactctggttatgggggcagcaggtggggttctaataacccaaaggattca
gatgatggtttaaacagttttccaggggccaaagttcaaaattctcctggaagggaagct
tttcctggtggttggggtggtgtaagtggcggttggggagatcgaagcggtagcgctaat
aacaatgacaatggtgtctggggacaagagattggtggtggtggtggtccaagtgatggt
gatcaaggaagctctggctggggaagcgcccccaagaaagcagcagctgggaacggatgg
gggtctggaaattctggttggtga
DBGET
integrated database retrieval system
